Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2646 and Dsui_2647 are separated by 0 nucleotides Dsui_2647 and Dsui_2648 are separated by 17 nucleotides
Dsui_2646: Dsui_2646 - AAA+ family ATPase, at 2,798,273 to 2,799,445
_2646
Dsui_2647: Dsui_2647 - subtilisin-like serine protease, at 2,799,446 to 2,801,671
_2647
Dsui_2648: Dsui_2648 - site-specific recombinase XerD, at 2,801,689 to 2,802,972
_2648
Position (kb)
2799
2800
2801
2802 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2799.428 kb on + strand at 2799.484 kb on + strand at 2799.487 kb on - strand at 2799.493 kb on - strand at 2799.507 kb on + strand at 2799.532 kb on + strand at 2799.534 kb on + strand at 2799.534 kb on - strand at 2799.550 kb on + strand at 2799.616 kb on + strand at 2799.624 kb on - strand at 2799.624 kb on - strand at 2799.650 kb on + strand at 2799.650 kb on + strand at 2799.655 kb on + strand at 2799.668 kb on - strand at 2799.711 kb on + strand, within Dsui_2647 at 2799.741 kb on + strand, within Dsui_2647 at 2799.769 kb on - strand at 2799.785 kb on + strand, within Dsui_2647 at 2799.835 kb on - strand, within Dsui_2647 at 2800.034 kb on + strand, within Dsui_2647 at 2800.042 kb on - strand, within Dsui_2647 at 2800.140 kb on + strand, within Dsui_2647 at 2800.145 kb on + strand, within Dsui_2647 at 2800.388 kb on - strand, within Dsui_2647 at 2800.465 kb on - strand, within Dsui_2647 at 2800.493 kb on + strand, within Dsui_2647 at 2800.528 kb on + strand, within Dsui_2647 at 2800.528 kb on + strand, within Dsui_2647 at 2800.615 kb on + strand, within Dsui_2647 at 2800.615 kb on + strand, within Dsui_2647 at 2800.615 kb on + strand, within Dsui_2647 at 2800.623 kb on - strand, within Dsui_2647 at 2800.623 kb on - strand, within Dsui_2647 at 2800.652 kb on + strand, within Dsui_2647 at 2800.669 kb on - strand, within Dsui_2647 at 2800.710 kb on + strand, within Dsui_2647 at 2800.807 kb on - strand, within Dsui_2647 at 2800.995 kb on + strand, within Dsui_2647 at 2800.998 kb on - strand, within Dsui_2647 at 2801.030 kb on + strand, within Dsui_2647 at 2801.183 kb on + strand, within Dsui_2647 at 2801.314 kb on + strand, within Dsui_2647 at 2801.334 kb on - strand, within Dsui_2647 at 2801.416 kb on - strand, within Dsui_2647 at 2801.476 kb on + strand at 2801.488 kb on + strand at 2801.550 kb on + strand at 2801.550 kb on + strand at 2801.603 kb on + strand at 2801.610 kb on + strand at 2801.667 kb on + strand at 2801.709 kb on + strand at 2801.858 kb on + strand, within Dsui_2648 at 2801.860 kb on + strand, within Dsui_2648 at 2801.946 kb on + strand, within Dsui_2648 at 2801.954 kb on - strand, within Dsui_2648 at 2802.028 kb on - strand, within Dsui_2648 at 2802.151 kb on - strand at 2802.204 kb on - strand, within Dsui_2648 at 2802.260 kb on + strand, within Dsui_2648 at 2802.269 kb on + strand, within Dsui_2648 at 2802.295 kb on + strand, within Dsui_2648 at 2802.305 kb on + strand, within Dsui_2648 at 2802.313 kb on - strand, within Dsui_2648 at 2802.314 kb on + strand, within Dsui_2648 at 2802.428 kb on + strand, within Dsui_2648 at 2802.441 kb on - strand, within Dsui_2648 at 2802.453 kb on + strand, within Dsui_2648 at 2802.499 kb on - strand, within Dsui_2648 at 2802.569 kb on + strand, within Dsui_2648 at 2802.579 kb on + strand, within Dsui_2648 at 2802.587 kb on - strand, within Dsui_2648 at 2802.646 kb on + strand, within Dsui_2648
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 2,799,428 + -2.4 2,799,484 + -0.4 2,799,487 - -0.4 2,799,493 - -1.0 2,799,507 + -1.0 2,799,532 + -1.9 2,799,534 + -0.4 2,799,534 - +0.6 2,799,550 + +0.6 2,799,616 + -1.0 2,799,624 - -1.4 2,799,624 - +0.6 2,799,650 + -1.4 2,799,650 + -1.8 2,799,655 + -2.6 2,799,668 - -0.4 2,799,711 + Dsui_2647 0.12 -1.0 2,799,741 + Dsui_2647 0.13 -1.4 2,799,769 - +0.6 2,799,785 + Dsui_2647 0.15 +0.1 2,799,835 - Dsui_2647 0.17 +0.6 2,800,034 + Dsui_2647 0.26 +0.6 2,800,042 - Dsui_2647 0.27 +0.6 2,800,140 + Dsui_2647 0.31 -3.3 2,800,145 + Dsui_2647 0.31 -1.0 2,800,388 - Dsui_2647 0.42 -1.0 2,800,465 - Dsui_2647 0.46 +0.6 2,800,493 + Dsui_2647 0.47 -0.4 2,800,528 + Dsui_2647 0.49 +2.6 2,800,528 + Dsui_2647 0.49 +1.6 2,800,615 + Dsui_2647 0.53 +0.6 2,800,615 + Dsui_2647 0.53 +0.6 2,800,615 + Dsui_2647 0.53 -1.0 2,800,623 - Dsui_2647 0.53 -0.4 2,800,623 - Dsui_2647 0.53 +0.6 2,800,652 + Dsui_2647 0.54 -1.0 2,800,669 - Dsui_2647 0.55 +0.6 2,800,710 + Dsui_2647 0.57 +0.6 2,800,807 - Dsui_2647 0.61 +0.6 2,800,995 + Dsui_2647 0.70 -2.3 2,800,998 - Dsui_2647 0.70 -1.0 2,801,030 + Dsui_2647 0.71 -1.6 2,801,183 + Dsui_2647 0.78 -1.0 2,801,314 + Dsui_2647 0.84 -1.8 2,801,334 - Dsui_2647 0.85 -0.4 2,801,416 - Dsui_2647 0.88 -0.4 2,801,476 + +0.6 2,801,488 + -0.0 2,801,550 + +0.6 2,801,550 + +2.1 2,801,603 + -0.4 2,801,610 + -1.1 2,801,667 + -1.8 2,801,709 + -2.6 2,801,858 + Dsui_2648 0.13 -0.4 2,801,860 + Dsui_2648 0.13 -0.4 2,801,946 + Dsui_2648 0.20 +1.1 2,801,954 - Dsui_2648 0.21 -1.8 2,802,028 - Dsui_2648 0.26 +0.6 2,802,151 - +0.6 2,802,204 - Dsui_2648 0.40 -0.4 2,802,260 + Dsui_2648 0.44 -0.4 2,802,269 + Dsui_2648 0.45 -1.4 2,802,295 + Dsui_2648 0.47 +0.6 2,802,305 + Dsui_2648 0.48 +0.6 2,802,313 - Dsui_2648 0.49 +0.6 2,802,314 + Dsui_2648 0.49 -2.0 2,802,428 + Dsui_2648 0.58 -1.8 2,802,441 - Dsui_2648 0.59 +0.6 2,802,453 + Dsui_2648 0.60 -1.8 2,802,499 - Dsui_2648 0.63 -1.4 2,802,569 + Dsui_2648 0.69 -0.9 2,802,579 + Dsui_2648 0.69 -0.4 2,802,587 - Dsui_2648 0.70 +0.6 2,802,646 + Dsui_2648 0.75 +1.6
Or see this region's nucleotide sequence