Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2462 and Dsui_2463 are separated by 67 nucleotides Dsui_2463 and Dsui_2464 are separated by 158 nucleotides Dsui_2464 and Dsui_2465 overlap by 4 nucleotides
Dsui_2462: Dsui_2462 - DNA repair protein RecO, at 2,619,644 to 2,620,357
_2462
Dsui_2463: Dsui_2463 - pyridoxine 5''-phosphate synthase, at 2,620,425 to 2,621,177
_2463
Dsui_2464: Dsui_2464 - holo-(acyl-carrier-protein) synthase, at 2,621,336 to 2,621,725
_2464
Dsui_2465: Dsui_2465 - beta-glucosidase-like glycosyl hydrolase, at 2,621,722 to 2,622,747
_2465
Position (kb)
2621
2622 Strain fitness (log2 ratio)
-1
0
1 at 2621.187 kb on - strand at 2621.188 kb on + strand at 2621.211 kb on + strand at 2621.211 kb on + strand at 2621.246 kb on + strand at 2621.258 kb on + strand at 2621.258 kb on + strand at 2621.258 kb on + strand at 2621.258 kb on + strand at 2621.258 kb on + strand at 2621.266 kb on - strand at 2621.266 kb on - strand at 2621.266 kb on - strand at 2621.267 kb on + strand at 2621.316 kb on - strand at 2621.778 kb on + strand at 2621.803 kb on + strand at 2621.811 kb on - strand at 2621.828 kb on + strand, within Dsui_2465 at 2621.868 kb on + strand, within Dsui_2465 at 2621.897 kb on - strand, within Dsui_2465 at 2621.897 kb on - strand at 2621.897 kb on - strand, within Dsui_2465 at 2622.046 kb on + strand, within Dsui_2465 at 2622.053 kb on - strand at 2622.209 kb on + strand, within Dsui_2465 at 2622.209 kb on + strand at 2622.272 kb on - strand, within Dsui_2465 at 2622.273 kb on - strand, within Dsui_2465 at 2622.520 kb on - strand, within Dsui_2465 at 2622.536 kb on - strand, within Dsui_2465
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 2,621,187 - +0.5 2,621,188 + -0.0 2,621,211 + -0.2 2,621,211 + +0.0 2,621,246 + -0.5 2,621,258 + -0.2 2,621,258 + -0.0 2,621,258 + -0.3 2,621,258 + -0.1 2,621,258 + +0.2 2,621,266 - -1.1 2,621,266 - -0.5 2,621,266 - +0.5 2,621,267 + -0.1 2,621,316 - +0.5 2,621,778 + -0.1 2,621,803 + -0.2 2,621,811 - +0.5 2,621,828 + Dsui_2465 0.10 -0.9 2,621,868 + Dsui_2465 0.14 -1.2 2,621,897 - Dsui_2465 0.17 -0.5 2,621,897 - -0.5 2,621,897 - Dsui_2465 0.17 -0.5 2,622,046 + Dsui_2465 0.32 -1.0 2,622,053 - +0.5 2,622,209 + Dsui_2465 0.47 -0.2 2,622,209 + +1.1 2,622,272 - Dsui_2465 0.54 -1.5 2,622,273 - Dsui_2465 0.54 -1.5 2,622,520 - Dsui_2465 0.78 -0.5 2,622,536 - Dsui_2465 0.79 +0.5
Or see this region's nucleotide sequence