Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2355 and Dsui_2356 are separated by 50 nucleotides Dsui_2356 and Dsui_2357 are separated by 76 nucleotides Dsui_2357 and Dsui_2358 are separated by 98 nucleotides
Dsui_2355: Dsui_2355 - cytochrome B561, at 2,506,956 to 2,507,495
_2355
Dsui_2356: Dsui_2356 - hypothetical protein, at 2,507,546 to 2,508,124
_2356
Dsui_2357: Dsui_2357 - hypothetical protein, at 2,508,201 to 2,508,767
_2357
Dsui_2358: Dsui_2358 - signal transduction histidine kinase, at 2,508,866 to 2,510,302
_2358
Position (kb)
2508
2509 Strain fitness (log2 ratio)
-1
0
1 at 2507.282 kb on + strand, within Dsui_2355 at 2507.282 kb on + strand, within Dsui_2355 at 2507.318 kb on + strand, within Dsui_2355 at 2507.349 kb on + strand at 2507.363 kb on + strand, within Dsui_2355 at 2507.371 kb on - strand at 2507.489 kb on + strand at 2507.522 kb on + strand at 2507.528 kb on - strand at 2507.617 kb on + strand at 2507.861 kb on + strand at 2507.909 kb on + strand at 2508.118 kb on + strand at 2508.148 kb on + strand at 2508.159 kb on + strand at 2508.169 kb on + strand at 2508.292 kb on + strand at 2508.466 kb on - strand at 2508.595 kb on + strand, within Dsui_2357 at 2508.837 kb on + strand at 2509.014 kb on + strand, within Dsui_2358 at 2509.120 kb on + strand, within Dsui_2358 at 2509.285 kb on - strand at 2509.314 kb on - strand at 2509.753 kb on + strand, within Dsui_2358
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 2,507,282 + Dsui_2355 0.60 +0.5 2,507,282 + Dsui_2355 0.60 -1.0 2,507,318 + Dsui_2355 0.67 -1.5 2,507,349 + +0.5 2,507,363 + Dsui_2355 0.75 -1.0 2,507,371 - -0.5 2,507,489 + -1.5 2,507,522 + -1.0 2,507,528 - -0.5 2,507,617 + -1.0 2,507,861 + +0.5 2,507,909 + +0.5 2,508,118 + +0.5 2,508,148 + +0.5 2,508,159 + -0.5 2,508,169 + +0.5 2,508,292 + +0.5 2,508,466 - +0.5 2,508,595 + Dsui_2357 0.69 -0.5 2,508,837 + +0.5 2,509,014 + Dsui_2358 0.10 +0.5 2,509,120 + Dsui_2358 0.18 -0.5 2,509,285 - +0.5 2,509,314 - -0.5 2,509,753 + Dsui_2358 0.62 -0.5
Or see this region's nucleotide sequence