Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2167 and Dsui_2168 are separated by 61 nucleotides Dsui_2168 and Dsui_2169 are separated by 71 nucleotides Dsui_2169 and Dsui_2170 overlap by 4 nucleotides
Dsui_2167: Dsui_2167 - TonB-dependent siderophore receptor, at 2,302,772 to 2,305,192
_2167
Dsui_2168: Dsui_2168 - putative hydrolase of alpha/beta superfamily, at 2,305,254 to 2,306,219
_2168
Dsui_2169: Dsui_2169 - hypothetical protein, at 2,306,291 to 2,306,572
_2169
Dsui_2170: Dsui_2170 - putative iron-regulated membrane protein, at 2,306,569 to 2,308,077
_2170
Position (kb)
2305
2306
2307 Strain fitness (log2 ratio)
-2
-1
0
1 at 2304.341 kb on - strand at 2304.358 kb on - strand at 2304.360 kb on - strand, within Dsui_2167 at 2304.384 kb on + strand, within Dsui_2167 at 2304.391 kb on - strand at 2304.515 kb on + strand at 2304.555 kb on - strand at 2304.555 kb on - strand at 2304.615 kb on - strand at 2304.685 kb on + strand at 2304.894 kb on + strand at 2304.900 kb on - strand at 2304.921 kb on + strand at 2304.923 kb on - strand at 2305.022 kb on - strand at 2305.107 kb on - strand at 2305.161 kb on + strand at 2305.191 kb on - strand at 2305.388 kb on + strand at 2305.596 kb on - strand at 2305.687 kb on - strand at 2306.214 kb on + strand at 2306.305 kb on + strand at 2306.407 kb on - strand at 2306.500 kb on + strand at 2306.838 kb on - strand at 2306.883 kb on - strand at 2306.938 kb on + strand, within Dsui_2170 at 2306.963 kb on + strand at 2307.021 kb on + strand at 2307.091 kb on - strand at 2307.109 kb on - strand, within Dsui_2170 at 2307.109 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 2,304,341 - -0.3 2,304,358 - +0.7 2,304,360 - Dsui_2167 0.66 +0.7 2,304,384 + Dsui_2167 0.67 -0.9 2,304,391 - +0.7 2,304,515 + -0.3 2,304,555 - +0.7 2,304,555 - +0.7 2,304,615 - -0.3 2,304,685 + +0.7 2,304,894 + +0.7 2,304,900 - -0.3 2,304,921 + -0.3 2,304,923 - -1.3 2,305,022 - -0.3 2,305,107 - +0.7 2,305,161 + -2.3 2,305,191 - -1.3 2,305,388 + -0.3 2,305,596 - -0.3 2,305,687 - +0.7 2,306,214 + +0.7 2,306,305 + -1.7 2,306,407 - +0.7 2,306,500 + +0.7 2,306,838 - +0.7 2,306,883 - -1.3 2,306,938 + Dsui_2170 0.24 -0.3 2,306,963 + +0.7 2,307,021 + +0.7 2,307,091 - +0.7 2,307,109 - Dsui_2170 0.36 -0.1 2,307,109 - +0.7
Or see this region's nucleotide sequence