Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2124 and Dsui_2125 are separated by 17 nucleotides Dsui_2125 and Dsui_2126 are separated by 197 nucleotides
Dsui_2124: Dsui_2124 - methyl-accepting chemotaxis protein, at 2,250,180 to 2,251,283
_2124
Dsui_2125: Dsui_2125 - PAS domain S-box, at 2,251,301 to 2,254,285
_2125
Dsui_2126: Dsui_2126 - alanine dehydrogenase, at 2,254,483 to 2,255,574
_2126
Position (kb)
2251
2252
2253
2254
2255 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2250.333 kb on + strand at 2250.761 kb on + strand at 2250.881 kb on - strand at 2250.924 kb on + strand, within Dsui_2124 at 2250.944 kb on + strand at 2250.980 kb on + strand at 2251.023 kb on + strand at 2251.221 kb on + strand at 2251.358 kb on + strand at 2251.511 kb on - strand at 2251.601 kb on + strand, within Dsui_2125 at 2251.609 kb on - strand at 2251.638 kb on - strand at 2251.643 kb on + strand, within Dsui_2125 at 2251.772 kb on - strand, within Dsui_2125 at 2251.839 kb on + strand at 2251.901 kb on - strand, within Dsui_2125 at 2252.037 kb on + strand at 2252.109 kb on + strand at 2252.217 kb on - strand at 2252.370 kb on + strand, within Dsui_2125 at 2252.379 kb on - strand at 2252.404 kb on + strand, within Dsui_2125 at 2252.414 kb on + strand at 2252.524 kb on + strand, within Dsui_2125 at 2252.572 kb on - strand, within Dsui_2125 at 2252.662 kb on - strand, within Dsui_2125 at 2252.843 kb on + strand at 2252.972 kb on - strand at 2253.053 kb on - strand, within Dsui_2125 at 2253.235 kb on - strand at 2253.414 kb on + strand at 2253.426 kb on + strand at 2253.475 kb on + strand at 2253.560 kb on + strand at 2253.601 kb on - strand, within Dsui_2125 at 2253.682 kb on - strand, within Dsui_2125 at 2253.690 kb on + strand at 2253.737 kb on - strand at 2253.869 kb on - strand, within Dsui_2125 at 2253.869 kb on - strand at 2254.177 kb on + strand at 2254.177 kb on + strand at 2254.222 kb on + strand at 2254.230 kb on - strand at 2254.235 kb on + strand at 2254.336 kb on + strand at 2254.342 kb on - strand at 2254.393 kb on - strand at 2254.422 kb on + strand at 2254.444 kb on + strand at 2254.553 kb on - strand at 2254.675 kb on - strand, within Dsui_2126 at 2254.770 kb on - strand, within Dsui_2126 at 2255.248 kb on - strand, within Dsui_2126 at 2255.255 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 2,250,333 + +0.7 2,250,761 + +0.7 2,250,881 - +0.7 2,250,924 + Dsui_2124 0.67 -0.9 2,250,944 + -0.3 2,250,980 + +0.7 2,251,023 + -0.3 2,251,221 + -0.3 2,251,358 + +0.7 2,251,511 - -0.3 2,251,601 + Dsui_2125 0.10 +0.7 2,251,609 - -1.3 2,251,638 - +0.7 2,251,643 + Dsui_2125 0.11 -1.3 2,251,772 - Dsui_2125 0.16 -2.1 2,251,839 + -0.3 2,251,901 - Dsui_2125 0.20 -0.3 2,252,037 + -0.3 2,252,109 + -0.3 2,252,217 - +0.7 2,252,370 + Dsui_2125 0.36 -0.3 2,252,379 - -0.9 2,252,404 + Dsui_2125 0.37 -0.9 2,252,414 + -0.9 2,252,524 + Dsui_2125 0.41 -2.6 2,252,572 - Dsui_2125 0.43 -0.3 2,252,662 - Dsui_2125 0.46 -0.9 2,252,843 + +0.7 2,252,972 - -0.3 2,253,053 - Dsui_2125 0.59 -0.3 2,253,235 - +0.7 2,253,414 + +0.7 2,253,426 + -0.3 2,253,475 + +0.7 2,253,560 + +0.7 2,253,601 - Dsui_2125 0.77 -2.8 2,253,682 - Dsui_2125 0.80 -1.2 2,253,690 + +0.7 2,253,737 - +0.7 2,253,869 - Dsui_2125 0.86 +0.7 2,253,869 - -0.3 2,254,177 + +0.7 2,254,177 + +0.7 2,254,222 + -0.3 2,254,230 - +0.7 2,254,235 + -0.3 2,254,336 + -0.3 2,254,342 - -0.3 2,254,393 - -0.3 2,254,422 + -0.9 2,254,444 + +0.7 2,254,553 - -0.3 2,254,675 - Dsui_2126 0.18 -0.3 2,254,770 - Dsui_2126 0.26 -1.3 2,255,248 - Dsui_2126 0.70 +0.3 2,255,255 + +0.7
Or see this region's nucleotide sequence