Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1751 and Dsui_1752 are separated by 60 nucleotides Dsui_1752 and Dsui_1753 are separated by 49 nucleotides Dsui_1753 and Dsui_1754 are separated by 15 nucleotides Dsui_1754 and Dsui_1755 are separated by 24 nucleotides
Dsui_1751: Dsui_1751 - flagellar hook-length control protein, at 1,837,499 to 1,838,620
_1751
Dsui_1752: Dsui_1752 - flagellar export protein FliJ, at 1,838,681 to 1,839,133
_1752
Dsui_1753: Dsui_1753 - flagellar protein export ATPase FliI, at 1,839,183 to 1,840,598
_1753
Dsui_1754: Dsui_1754 - flagellar biosynthesis/type III secretory pathway protein, at 1,840,614 to 1,841,297
_1754
Dsui_1755: Dsui_1755 - flagellar motor switch protein FliG, at 1,841,322 to 1,842,323
_1755
Position (kb)
1839
1840
1841 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1838.321 kb on + strand, within Dsui_1751 at 1838.322 kb on - strand, within Dsui_1751 at 1838.322 kb on - strand, within Dsui_1751 at 1838.322 kb on - strand, within Dsui_1751 at 1838.510 kb on + strand at 1838.605 kb on + strand at 1838.613 kb on - strand at 1838.613 kb on - strand at 1838.703 kb on + strand at 1838.850 kb on + strand at 1838.850 kb on + strand, within Dsui_1752 at 1838.948 kb on + strand, within Dsui_1752 at 1839.032 kb on - strand, within Dsui_1752 at 1839.147 kb on - strand at 1839.167 kb on - strand at 1839.241 kb on + strand at 1839.242 kb on + strand at 1839.250 kb on - strand at 1839.312 kb on - strand at 1839.347 kb on + strand at 1839.347 kb on + strand at 1839.347 kb on + strand, within Dsui_1753 at 1839.355 kb on - strand, within Dsui_1753 at 1839.378 kb on - strand, within Dsui_1753 at 1839.380 kb on + strand at 1839.397 kb on + strand, within Dsui_1753 at 1839.398 kb on - strand, within Dsui_1753 at 1839.407 kb on + strand, within Dsui_1753 at 1839.422 kb on + strand, within Dsui_1753 at 1839.430 kb on - strand, within Dsui_1753 at 1839.496 kb on - strand, within Dsui_1753 at 1839.531 kb on - strand, within Dsui_1753 at 1839.566 kb on + strand, within Dsui_1753 at 1839.577 kb on + strand, within Dsui_1753 at 1839.585 kb on - strand, within Dsui_1753 at 1839.760 kb on + strand, within Dsui_1753 at 1839.938 kb on - strand, within Dsui_1753 at 1839.973 kb on + strand, within Dsui_1753 at 1840.026 kb on + strand, within Dsui_1753 at 1840.178 kb on - strand, within Dsui_1753 at 1840.211 kb on + strand, within Dsui_1753 at 1840.232 kb on + strand at 1840.324 kb on + strand, within Dsui_1753 at 1840.480 kb on + strand at 1840.520 kb on + strand at 1840.525 kb on - strand at 1840.582 kb on - strand at 1840.598 kb on + strand at 1840.601 kb on - strand at 1840.601 kb on - strand at 1840.601 kb on - strand at 1840.862 kb on + strand, within Dsui_1754 at 1840.870 kb on - strand, within Dsui_1754 at 1841.006 kb on + strand at 1841.029 kb on + strand, within Dsui_1754 at 1841.089 kb on + strand, within Dsui_1754 at 1841.095 kb on + strand, within Dsui_1754 at 1841.139 kb on - strand, within Dsui_1754 at 1841.169 kb on - strand, within Dsui_1754 at 1841.227 kb on - strand, within Dsui_1754 at 1841.243 kb on + strand at 1841.333 kb on - strand at 1841.389 kb on + strand at 1841.439 kb on + strand, within Dsui_1755 at 1841.446 kb on + strand, within Dsui_1755 at 1841.454 kb on - strand, within Dsui_1755 at 1841.454 kb on - strand, within Dsui_1755 at 1841.548 kb on - strand, within Dsui_1755
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 1,838,321 + Dsui_1751 0.73 -0.5 1,838,322 - Dsui_1751 0.73 +0.5 1,838,322 - Dsui_1751 0.73 -2.1 1,838,322 - Dsui_1751 0.73 +0.5 1,838,510 + +0.4 1,838,605 + +0.4 1,838,613 - -0.6 1,838,613 - +0.4 1,838,703 + -1.1 1,838,850 + -0.6 1,838,850 + Dsui_1752 0.37 -1.9 1,838,948 + Dsui_1752 0.59 -0.6 1,839,032 - Dsui_1752 0.77 +0.6 1,839,147 - -0.1 1,839,167 - -0.4 1,839,241 + +0.4 1,839,242 + -1.1 1,839,250 - -0.5 1,839,312 - -1.6 1,839,347 + +0.4 1,839,347 + +0.4 1,839,347 + Dsui_1753 0.12 +0.4 1,839,355 - Dsui_1753 0.12 +0.1 1,839,378 - Dsui_1753 0.14 -0.6 1,839,380 + +0.4 1,839,397 + Dsui_1753 0.15 -1.1 1,839,398 - Dsui_1753 0.15 -1.1 1,839,407 + Dsui_1753 0.16 -2.9 1,839,422 + Dsui_1753 0.17 -2.4 1,839,430 - Dsui_1753 0.17 +0.1 1,839,496 - Dsui_1753 0.22 +0.0 1,839,531 - Dsui_1753 0.25 -0.1 1,839,566 + Dsui_1753 0.27 +0.4 1,839,577 + Dsui_1753 0.28 -1.6 1,839,585 - Dsui_1753 0.28 +0.1 1,839,760 + Dsui_1753 0.41 -1.6 1,839,938 - Dsui_1753 0.53 -0.4 1,839,973 + Dsui_1753 0.56 +1.4 1,840,026 + Dsui_1753 0.60 -1.6 1,840,178 - Dsui_1753 0.70 -0.7 1,840,211 + Dsui_1753 0.73 +0.4 1,840,232 + +0.4 1,840,324 + Dsui_1753 0.81 -1.2 1,840,480 + -1.0 1,840,520 + -1.1 1,840,525 - +0.1 1,840,582 - -0.3 1,840,598 + -0.6 1,840,601 - -0.1 1,840,601 - -0.1 1,840,601 - -0.2 1,840,862 + Dsui_1754 0.36 +0.4 1,840,870 - Dsui_1754 0.37 +0.3 1,841,006 + +0.4 1,841,029 + Dsui_1754 0.61 -1.1 1,841,089 + Dsui_1754 0.69 -0.6 1,841,095 + Dsui_1754 0.70 -1.1 1,841,139 - Dsui_1754 0.77 +0.1 1,841,169 - Dsui_1754 0.81 +0.1 1,841,227 - Dsui_1754 0.90 -0.1 1,841,243 + -0.6 1,841,333 - -0.2 1,841,389 + -2.7 1,841,439 + Dsui_1755 0.12 -0.9 1,841,446 + Dsui_1755 0.12 -1.1 1,841,454 - Dsui_1755 0.13 +0.1 1,841,454 - Dsui_1755 0.13 -0.1 1,841,548 - Dsui_1755 0.23 -0.0
Or see this region's nucleotide sequence