Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1061 and Dsui_1062 are separated by 182 nucleotides Dsui_1062 and Dsui_1063 are separated by 441 nucleotides
Dsui_1061: Dsui_1061 - membrane-bound lytic murein transglycosylase, at 1,093,534 to 1,094,772
_1061
Dsui_1062: Dsui_1062 - ammonia permease, at 1,094,955 to 1,096,160
_1062
Dsui_1063: Dsui_1063 - hypothetical protein, at 1,096,602 to 1,097,858
_1063
Position (kb)
1094
1095
1096
1097 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1094.029 kb on + strand, within Dsui_1061 at 1094.053 kb on + strand, within Dsui_1061 at 1094.055 kb on + strand, within Dsui_1061 at 1094.063 kb on - strand, within Dsui_1061 at 1094.068 kb on - strand, within Dsui_1061 at 1094.192 kb on - strand, within Dsui_1061 at 1094.327 kb on + strand, within Dsui_1061 at 1094.427 kb on + strand, within Dsui_1061 at 1094.586 kb on - strand, within Dsui_1061 at 1094.615 kb on + strand, within Dsui_1061 at 1094.753 kb on - strand at 1094.756 kb on + strand at 1094.883 kb on - strand at 1094.896 kb on + strand at 1095.004 kb on + strand at 1095.004 kb on + strand at 1095.012 kb on - strand at 1095.040 kb on + strand at 1095.048 kb on - strand at 1095.072 kb on - strand at 1095.074 kb on + strand at 1095.074 kb on + strand at 1095.074 kb on + strand at 1095.082 kb on - strand, within Dsui_1062 at 1095.086 kb on + strand, within Dsui_1062 at 1095.104 kb on - strand, within Dsui_1062 at 1095.120 kb on - strand, within Dsui_1062 at 1095.357 kb on + strand, within Dsui_1062 at 1095.365 kb on - strand, within Dsui_1062 at 1095.480 kb on + strand, within Dsui_1062 at 1095.567 kb on - strand, within Dsui_1062 at 1095.574 kb on + strand, within Dsui_1062 at 1095.659 kb on - strand, within Dsui_1062 at 1095.667 kb on + strand, within Dsui_1062 at 1095.699 kb on + strand, within Dsui_1062 at 1095.704 kb on + strand, within Dsui_1062 at 1095.769 kb on + strand, within Dsui_1062 at 1095.849 kb on + strand, within Dsui_1062 at 1095.946 kb on - strand, within Dsui_1062 at 1095.958 kb on - strand, within Dsui_1062 at 1096.015 kb on - strand, within Dsui_1062 at 1096.040 kb on + strand at 1096.040 kb on + strand at 1096.040 kb on + strand at 1096.040 kb on + strand at 1096.043 kb on - strand at 1096.048 kb on - strand at 1096.048 kb on - strand at 1096.061 kb on + strand at 1096.061 kb on + strand at 1096.069 kb on - strand at 1096.069 kb on - strand at 1096.089 kb on + strand at 1096.089 kb on + strand at 1096.092 kb on + strand at 1096.097 kb on - strand at 1096.102 kb on - strand at 1096.126 kb on - strand at 1096.132 kb on + strand at 1096.132 kb on + strand at 1096.132 kb on + strand at 1096.142 kb on + strand at 1096.150 kb on + strand at 1096.173 kb on - strand at 1096.258 kb on + strand at 1096.267 kb on + strand at 1096.289 kb on + strand at 1096.292 kb on + strand at 1096.292 kb on + strand at 1096.321 kb on - strand at 1096.336 kb on + strand at 1096.348 kb on - strand at 1096.354 kb on - strand at 1096.363 kb on - strand at 1096.373 kb on + strand at 1096.374 kb on + strand at 1096.374 kb on + strand at 1096.374 kb on + strand at 1096.374 kb on + strand at 1096.382 kb on - strand at 1096.382 kb on - strand at 1096.382 kb on - strand at 1096.382 kb on - strand at 1096.382 kb on - strand at 1096.382 kb on - strand at 1096.383 kb on - strand at 1096.387 kb on - strand at 1096.392 kb on - strand at 1096.397 kb on + strand at 1096.397 kb on + strand at 1096.420 kb on + strand at 1096.420 kb on + strand at 1096.421 kb on + strand at 1096.427 kb on - strand at 1096.438 kb on + strand at 1096.468 kb on + strand at 1096.468 kb on + strand at 1096.476 kb on + strand at 1096.476 kb on - strand at 1096.501 kb on - strand at 1096.520 kb on + strand at 1096.528 kb on - strand at 1096.533 kb on + strand at 1096.553 kb on + strand at 1096.556 kb on - strand at 1096.558 kb on + strand at 1096.558 kb on + strand at 1096.561 kb on - strand at 1096.561 kb on - strand at 1096.569 kb on + strand at 1096.571 kb on - strand at 1096.577 kb on - strand at 1096.600 kb on + strand at 1096.600 kb on + strand at 1096.608 kb on - strand at 1096.608 kb on - strand at 1096.637 kb on - strand at 1096.662 kb on - strand at 1096.662 kb on - strand at 1096.686 kb on - strand at 1096.703 kb on + strand at 1096.724 kb on - strand at 1096.736 kb on - strand, within Dsui_1063 at 1096.789 kb on + strand, within Dsui_1063 at 1096.789 kb on + strand, within Dsui_1063 at 1096.797 kb on - strand, within Dsui_1063 at 1096.797 kb on - strand, within Dsui_1063 at 1096.818 kb on + strand, within Dsui_1063 at 1096.832 kb on - strand, within Dsui_1063 at 1096.839 kb on + strand, within Dsui_1063 at 1096.846 kb on + strand, within Dsui_1063 at 1096.857 kb on + strand, within Dsui_1063 at 1096.864 kb on - strand, within Dsui_1063 at 1096.877 kb on + strand, within Dsui_1063 at 1096.885 kb on - strand, within Dsui_1063 at 1096.906 kb on + strand, within Dsui_1063 at 1096.906 kb on + strand, within Dsui_1063 at 1096.916 kb on + strand, within Dsui_1063 at 1096.923 kb on - strand, within Dsui_1063 at 1096.934 kb on + strand, within Dsui_1063 at 1096.937 kb on - strand, within Dsui_1063 at 1096.952 kb on + strand, within Dsui_1063 at 1096.952 kb on + strand, within Dsui_1063 at 1096.960 kb on - strand, within Dsui_1063 at 1096.972 kb on + strand, within Dsui_1063 at 1096.979 kb on - strand, within Dsui_1063 at 1096.980 kb on + strand, within Dsui_1063 at 1096.982 kb on + strand, within Dsui_1063 at 1096.982 kb on + strand, within Dsui_1063 at 1096.987 kb on + strand, within Dsui_1063 at 1096.990 kb on - strand, within Dsui_1063 at 1096.990 kb on - strand, within Dsui_1063 at 1096.990 kb on - strand, within Dsui_1063 at 1096.992 kb on + strand, within Dsui_1063 at 1097.010 kb on + strand, within Dsui_1063 at 1097.095 kb on + strand, within Dsui_1063 at 1097.098 kb on - strand, within Dsui_1063 at 1097.103 kb on - strand, within Dsui_1063 at 1097.120 kb on - strand, within Dsui_1063 at 1097.124 kb on + strand at 1097.129 kb on + strand, within Dsui_1063 at 1097.145 kb on - strand, within Dsui_1063
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 1,094,029 + Dsui_1061 0.40 -0.4 1,094,053 + Dsui_1061 0.42 -0.6 1,094,055 + Dsui_1061 0.42 -0.2 1,094,063 - Dsui_1061 0.43 +0.5 1,094,068 - Dsui_1061 0.43 +0.5 1,094,192 - Dsui_1061 0.53 +0.5 1,094,327 + Dsui_1061 0.64 -0.8 1,094,427 + Dsui_1061 0.72 -0.3 1,094,586 - Dsui_1061 0.85 -1.1 1,094,615 + Dsui_1061 0.87 -0.4 1,094,753 - +0.5 1,094,756 + +0.1 1,094,883 - -1.8 1,094,896 + -0.1 1,095,004 + +0.0 1,095,004 + -1.6 1,095,012 - +0.5 1,095,040 + -0.5 1,095,048 - -1.1 1,095,072 - -1.1 1,095,074 + +0.5 1,095,074 + +0.0 1,095,074 + +1.0 1,095,082 - Dsui_1062 0.11 +0.5 1,095,086 + Dsui_1062 0.11 -0.5 1,095,104 - Dsui_1062 0.12 -2.5 1,095,120 - Dsui_1062 0.14 +0.5 1,095,357 + Dsui_1062 0.33 +1.1 1,095,365 - Dsui_1062 0.34 -1.1 1,095,480 + Dsui_1062 0.44 -0.8 1,095,567 - Dsui_1062 0.51 +0.5 1,095,574 + Dsui_1062 0.51 -1.1 1,095,659 - Dsui_1062 0.58 +0.5 1,095,667 + Dsui_1062 0.59 -0.1 1,095,699 + Dsui_1062 0.62 +0.5 1,095,704 + Dsui_1062 0.62 +0.5 1,095,769 + Dsui_1062 0.67 +1.5 1,095,849 + Dsui_1062 0.74 -1.2 1,095,946 - Dsui_1062 0.82 -1.5 1,095,958 - Dsui_1062 0.83 -0.5 1,096,015 - Dsui_1062 0.88 -1.5 1,096,040 + -1.1 1,096,040 + -0.2 1,096,040 + +1.1 1,096,040 + +0.5 1,096,043 - -1.1 1,096,048 - +0.5 1,096,048 - -0.5 1,096,061 + -1.1 1,096,061 + -0.1 1,096,069 - +0.5 1,096,069 - +0.5 1,096,089 + +0.5 1,096,089 + +0.5 1,096,092 + -0.5 1,096,097 - -1.1 1,096,102 - +0.5 1,096,126 - -2.1 1,096,132 + -2.8 1,096,132 + -0.1 1,096,132 + -1.1 1,096,142 + +0.5 1,096,150 + -1.5 1,096,173 - +0.5 1,096,258 + -1.8 1,096,267 + -1.5 1,096,289 + +0.5 1,096,292 + -2.5 1,096,292 + -1.1 1,096,321 - -1.1 1,096,336 + +0.5 1,096,348 - +0.5 1,096,354 - +0.5 1,096,363 - +0.5 1,096,373 + -1.1 1,096,374 + +0.5 1,096,374 + -1.1 1,096,374 + +0.5 1,096,374 + +0.5 1,096,382 - +0.5 1,096,382 - -1.2 1,096,382 - -1.5 1,096,382 - +0.1 1,096,382 - -0.7 1,096,382 - -1.1 1,096,383 - -0.5 1,096,387 - +0.3 1,096,392 - +1.2 1,096,397 + -2.3 1,096,397 + +0.5 1,096,420 + -1.1 1,096,420 + -2.1 1,096,421 + +0.5 1,096,427 - -1.1 1,096,438 + -1.5 1,096,468 + +0.5 1,096,468 + -1.8 1,096,476 + +0.5 1,096,476 - -0.3 1,096,501 - +2.5 1,096,520 + +0.5 1,096,528 - +1.2 1,096,533 + -2.8 1,096,553 + +0.5 1,096,556 - -1.1 1,096,558 + +0.5 1,096,558 + -0.5 1,096,561 - -0.0 1,096,561 - +0.3 1,096,569 + -0.5 1,096,571 - +0.5 1,096,577 - -0.5 1,096,600 + +0.5 1,096,600 + +0.5 1,096,608 - +2.1 1,096,608 - -1.5 1,096,637 - +0.5 1,096,662 - -1.1 1,096,662 - -1.3 1,096,686 - -0.1 1,096,703 + +0.5 1,096,724 - +0.0 1,096,736 - Dsui_1063 0.11 -0.4 1,096,789 + Dsui_1063 0.15 +2.1 1,096,789 + Dsui_1063 0.15 -1.3 1,096,797 - Dsui_1063 0.16 +0.5 1,096,797 - Dsui_1063 0.16 -1.5 1,096,818 + Dsui_1063 0.17 -0.8 1,096,832 - Dsui_1063 0.18 -0.5 1,096,839 + Dsui_1063 0.19 -1.7 1,096,846 + Dsui_1063 0.19 +0.5 1,096,857 + Dsui_1063 0.20 +0.5 1,096,864 - Dsui_1063 0.21 -2.2 1,096,877 + Dsui_1063 0.22 -0.5 1,096,885 - Dsui_1063 0.23 -0.3 1,096,906 + Dsui_1063 0.24 +0.5 1,096,906 + Dsui_1063 0.24 -0.5 1,096,916 + Dsui_1063 0.25 -3.4 1,096,923 - Dsui_1063 0.26 +1.3 1,096,934 + Dsui_1063 0.26 -0.5 1,096,937 - Dsui_1063 0.27 -1.5 1,096,952 + Dsui_1063 0.28 -1.5 1,096,952 + Dsui_1063 0.28 -1.1 1,096,960 - Dsui_1063 0.28 -2.1 1,096,972 + Dsui_1063 0.29 -1.5 1,096,979 - Dsui_1063 0.30 +0.5 1,096,980 + Dsui_1063 0.30 +0.5 1,096,982 + Dsui_1063 0.30 -1.5 1,096,982 + Dsui_1063 0.30 -2.3 1,096,987 + Dsui_1063 0.31 -0.5 1,096,990 - Dsui_1063 0.31 -0.9 1,096,990 - Dsui_1063 0.31 -0.7 1,096,990 - Dsui_1063 0.31 +0.2 1,096,992 + Dsui_1063 0.31 -1.8 1,097,010 + Dsui_1063 0.32 -1.8 1,097,095 + Dsui_1063 0.39 -0.5 1,097,098 - Dsui_1063 0.39 -1.1 1,097,103 - Dsui_1063 0.40 -0.5 1,097,120 - Dsui_1063 0.41 +0.5 1,097,124 + +0.5 1,097,129 + Dsui_1063 0.42 -1.1 1,097,145 - Dsui_1063 0.43 +0.5
Or see this region's nucleotide sequence