Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0830 and Dsui_0831 are separated by 229 nucleotides Dsui_0831 and Dsui_0833 are separated by 398 nucleotides Dsui_0833 and Dsui_0834 are separated by 41 nucleotides
Dsui_0830: Dsui_0830 - DNA polymerase III, beta subunit, at 845,344 to 846,450
_0830
Dsui_0831: Dsui_0831 - chromosomal replication initiator protein DnaA, at 846,680 to 848,101
_0831
Dsui_0833: Dsui_0833 - ribosomal protein L34, bacterial type, at 848,500 to 848,634
_0833
Dsui_0834: Dsui_0834 - ribonuclease P protein component, at 848,676 to 849,140
_0834
Position (kb)
846
847
848
849 Strain fitness (log2 ratio)
-2
-1
0
1 at 846.488 kb on - strand at 846.488 kb on - strand at 846.523 kb on + strand at 846.526 kb on - strand at 846.531 kb on - strand at 846.531 kb on - strand at 846.531 kb on - strand at 846.531 kb on - strand at 846.531 kb on - strand at 846.541 kb on - strand at 846.546 kb on + strand at 846.554 kb on - strand at 846.554 kb on - strand at 846.554 kb on - strand at 846.604 kb on - strand at 846.604 kb on - strand at 846.609 kb on - strand at 846.663 kb on + strand at 846.669 kb on - strand at 846.669 kb on - strand at 848.183 kb on - strand at 848.236 kb on - strand at 848.253 kb on - strand at 848.253 kb on - strand at 848.258 kb on - strand at 848.262 kb on + strand at 848.262 kb on + strand at 848.262 kb on + strand at 848.265 kb on - strand at 848.270 kb on - strand at 848.270 kb on - strand at 848.270 kb on - strand at 848.270 kb on - strand at 848.270 kb on - strand at 848.270 kb on - strand at 848.270 kb on - strand at 848.388 kb on - strand at 848.427 kb on + strand at 848.430 kb on - strand at 848.435 kb on - strand at 848.435 kb on - strand at 848.638 kb on + strand at 849.058 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 846,488 - +0.1 846,488 - +0.2 846,523 + +0.5 846,526 - +0.1 846,531 - +0.1 846,531 - +0.2 846,531 - -0.2 846,531 - +0.1 846,531 - +0.1 846,541 - +0.1 846,546 + -0.5 846,554 - +0.2 846,554 - +0.3 846,554 - +0.1 846,604 - +0.1 846,604 - +0.2 846,609 - +0.2 846,663 + -1.5 846,669 - +0.2 846,669 - +0.4 848,183 - -0.1 848,236 - +0.3 848,253 - -0.1 848,253 - +0.2 848,258 - +0.3 848,262 + +0.5 848,262 + +0.5 848,262 + +0.5 848,265 - +0.4 848,270 - +0.2 848,270 - +0.1 848,270 - +0.2 848,270 - +0.3 848,270 - -0.1 848,270 - +0.1 848,270 - +0.2 848,388 - -0.5 848,427 + -2.3 848,430 - -0.5 848,435 - +0.5 848,435 - +0.5 848,638 + +0.5 849,058 - +0.5
Or see this region's nucleotide sequence