Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0522 and Dsui_0523 overlap by 1 nucleotides Dsui_0523 and Dsui_0524 are separated by 244 nucleotides
Dsui_0522: Dsui_0522 - SSS sodium solute transporter, at 529,167 to 530,840
_0522
Dsui_0523: Dsui_0523 - putative membrane protein, at 530,840 to 531,160
_0523
Dsui_0524: Dsui_0524 - putative permease, at 531,405 to 532,208
_0524
Position (kb) 530
531
532 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 529.855 kb on + strand, within Dsui_0522 at 529.868 kb on - strand, within Dsui_0522 at 529.873 kb on - strand, within Dsui_0522 at 530.025 kb on + strand, within Dsui_0522 at 530.046 kb on - strand, within Dsui_0522 at 530.046 kb on - strand, within Dsui_0522 at 530.071 kb on + strand, within Dsui_0522 at 530.079 kb on - strand, within Dsui_0522 at 530.215 kb on - strand, within Dsui_0522 at 530.240 kb on - strand, within Dsui_0522 at 530.273 kb on - strand, within Dsui_0522 at 530.354 kb on + strand, within Dsui_0522 at 530.385 kb on + strand, within Dsui_0522 at 530.402 kb on + strand, within Dsui_0522 at 530.441 kb on - strand, within Dsui_0522 at 530.537 kb on - strand, within Dsui_0522 at 530.543 kb on + strand, within Dsui_0522 at 530.550 kb on + strand, within Dsui_0522 at 530.635 kb on + strand, within Dsui_0522 at 530.635 kb on + strand, within Dsui_0522 at 530.685 kb on + strand at 530.813 kb on + strand at 530.862 kb on + strand at 530.944 kb on + strand, within Dsui_0523 at 530.991 kb on + strand, within Dsui_0523 at 531.077 kb on + strand, within Dsui_0523 at 531.155 kb on + strand at 531.163 kb on - strand at 531.165 kb on - strand at 531.168 kb on - strand at 531.210 kb on + strand at 531.217 kb on + strand at 531.217 kb on + strand at 531.222 kb on + strand at 531.224 kb on - strand at 531.225 kb on - strand at 531.230 kb on - strand at 531.260 kb on + strand at 531.329 kb on + strand at 531.329 kb on + strand at 531.492 kb on + strand, within Dsui_0524 at 531.546 kb on - strand, within Dsui_0524 at 531.613 kb on - strand, within Dsui_0524 at 531.626 kb on - strand, within Dsui_0524 at 531.655 kb on - strand, within Dsui_0524 at 531.703 kb on + strand, within Dsui_0524 at 531.704 kb on + strand, within Dsui_0524 at 531.842 kb on + strand, within Dsui_0524 at 531.845 kb on - strand, within Dsui_0524 at 531.925 kb on + strand, within Dsui_0524 at 531.928 kb on - strand, within Dsui_0524 at 531.933 kb on - strand, within Dsui_0524 at 531.952 kb on - strand, within Dsui_0524 at 531.986 kb on + strand, within Dsui_0524 at 532.037 kb on - strand, within Dsui_0524 at 532.077 kb on - strand, within Dsui_0524
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 529,855 + Dsui_0522 0.41 -1.2 529,868 - Dsui_0522 0.42 -0.6 529,873 - Dsui_0522 0.42 +0.4 530,025 + Dsui_0522 0.51 +0.4 530,046 - Dsui_0522 0.53 -1.6 530,046 - Dsui_0522 0.53 -1.6 530,071 + Dsui_0522 0.54 +0.4 530,079 - Dsui_0522 0.54 -1.2 530,215 - Dsui_0522 0.63 -1.2 530,240 - Dsui_0522 0.64 -1.2 530,273 - Dsui_0522 0.66 -1.6 530,354 + Dsui_0522 0.71 -0.6 530,385 + Dsui_0522 0.73 -1.9 530,402 + Dsui_0522 0.74 -0.6 530,441 - Dsui_0522 0.76 -3.5 530,537 - Dsui_0522 0.82 -2.2 530,543 + Dsui_0522 0.82 +0.4 530,550 + Dsui_0522 0.83 -0.2 530,635 + Dsui_0522 0.88 +0.4 530,635 + Dsui_0522 0.88 -0.6 530,685 + -1.6 530,813 + -1.2 530,862 + -1.6 530,944 + Dsui_0523 0.32 -2.6 530,991 + Dsui_0523 0.47 +0.4 531,077 + Dsui_0523 0.74 -0.6 531,155 + -0.6 531,163 - -0.6 531,165 - -1.9 531,168 - -0.6 531,210 + +0.4 531,217 + -0.6 531,217 + +0.4 531,222 + -1.2 531,224 - +0.4 531,225 - +0.4 531,230 - -1.6 531,260 + +0.4 531,329 + -0.6 531,329 + -0.6 531,492 + Dsui_0524 0.11 -1.5 531,546 - Dsui_0524 0.18 -0.1 531,613 - Dsui_0524 0.26 -0.1 531,626 - Dsui_0524 0.27 -0.6 531,655 - Dsui_0524 0.31 -0.3 531,703 + Dsui_0524 0.37 -3.5 531,704 + Dsui_0524 0.37 -1.9 531,842 + Dsui_0524 0.54 -0.6 531,845 - Dsui_0524 0.55 -0.1 531,925 + Dsui_0524 0.65 -0.6 531,928 - Dsui_0524 0.65 -0.2 531,933 - Dsui_0524 0.66 -0.2 531,952 - Dsui_0524 0.68 -0.2 531,986 + Dsui_0524 0.72 -0.6 532,037 - Dsui_0524 0.79 -0.2 532,077 - Dsui_0524 0.84 -0.2
Or see this region's nucleotide sequence