Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0452 and Dsui_0453 are separated by 7 nucleotides Dsui_0453 and Dsui_0454 overlap by 17 nucleotides Dsui_0454 and Dsui_0455 are separated by 3 nucleotides Dsui_0455 and Dsui_0456 are separated by 90 nucleotides
Dsui_0452: Dsui_0452 - iojap-like ribosome-associated protein, at 458,157 to 458,528
_0452
Dsui_0453: Dsui_0453 - nicotinate/nicotinamide nucleotide adenylyltransferase, at 458,536 to 459,210
_0453
Dsui_0454: Dsui_0454 - hypothetical protein, at 459,194 to 460,024
_0454
Dsui_0455: Dsui_0455 - putative integral membrane protein, at 460,028 to 460,786
_0455
Dsui_0456: Dsui_0456 - homoserine kinase, Neisseria type, at 460,877 to 461,818
_0456
Position (kb) 459
460
461 Strain fitness (log2 ratio) -2
-1
0
1 at 458.379 kb on + strand at 458.441 kb on + strand, within Dsui_0452 at 458.442 kb on - strand, within Dsui_0452 at 458.449 kb on - strand, within Dsui_0452 at 458.473 kb on + strand, within Dsui_0452 at 458.483 kb on + strand, within Dsui_0452 at 458.483 kb on + strand at 458.483 kb on + strand, within Dsui_0452 at 458.483 kb on + strand, within Dsui_0452 at 458.491 kb on - strand at 459.200 kb on - strand at 459.200 kb on - strand at 459.231 kb on - strand at 459.431 kb on - strand, within Dsui_0454 at 459.543 kb on - strand, within Dsui_0454 at 459.942 kb on - strand at 459.973 kb on - strand at 460.021 kb on + strand at 460.059 kb on + strand at 460.067 kb on - strand at 460.067 kb on - strand at 460.140 kb on + strand at 460.148 kb on - strand, within Dsui_0455 at 460.226 kb on - strand, within Dsui_0455 at 460.241 kb on - strand, within Dsui_0455 at 460.435 kb on + strand at 460.439 kb on - strand, within Dsui_0455 at 460.449 kb on - strand, within Dsui_0455 at 460.609 kb on - strand, within Dsui_0455 at 460.611 kb on + strand at 460.619 kb on - strand, within Dsui_0455 at 460.645 kb on - strand, within Dsui_0455 at 460.650 kb on + strand at 460.926 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 458,379 + +0.4 458,441 + Dsui_0452 0.76 -0.6 458,442 - Dsui_0452 0.77 -0.5 458,449 - Dsui_0452 0.78 -0.4 458,473 + Dsui_0452 0.85 -1.9 458,483 + Dsui_0452 0.88 -0.6 458,483 + -0.6 458,483 + Dsui_0452 0.88 -1.2 458,483 + Dsui_0452 0.88 -0.6 458,491 - -0.1 459,200 - -2.2 459,200 - +0.2 459,231 - -0.9 459,431 - Dsui_0454 0.29 -0.8 459,543 - Dsui_0454 0.42 -1.8 459,942 - -1.5 459,973 - -2.3 460,021 + -0.6 460,059 + +0.4 460,067 - +0.1 460,067 - -0.3 460,140 + +0.4 460,148 - Dsui_0455 0.16 +0.0 460,226 - Dsui_0455 0.26 -0.0 460,241 - Dsui_0455 0.28 -1.4 460,435 + +0.4 460,439 - Dsui_0455 0.54 -0.6 460,449 - Dsui_0455 0.55 -0.6 460,609 - Dsui_0455 0.77 -0.5 460,611 + +0.4 460,619 - Dsui_0455 0.78 -0.2 460,645 - Dsui_0455 0.81 -0.8 460,650 + -1.2 460,926 - +0.0
Or see this region's nucleotide sequence