Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03159

Experiment: PYE_noCalcium 25C survival rep2 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 25C survival rep2 12 days
3,313,474	-				+0.3
3,313,486	-				-0.3
3,313,514	+				+1.7
3,313,546	+				+0.5
3,313,550	+				+1.3
3,313,550	+				+1.0
3,313,564	+				+0.9
3,313,577	-				-0.1
3,313,587	+				+0.7
3,313,602	+				+1.8
3,313,653	+		CCNA_03158	0.15	+1.2
3,313,656	-		CCNA_03158	0.15	+0.7
3,313,695	-		CCNA_03158	0.19	+0.2
3,313,705	+		CCNA_03158	0.20	+1.4
3,313,705	+		CCNA_03158	0.20	+0.6
3,313,705	+		CCNA_03158	0.20	+1.0
3,313,705	+		CCNA_03158	0.20	-0.2
3,313,713	-		CCNA_03158	0.21	-0.0
3,313,713	-		CCNA_03158	0.21	+0.3
3,313,713	-		CCNA_03158	0.21	-1.0
3,313,723	-		CCNA_03158	0.22	+1.7
3,313,738	-		CCNA_03158	0.24	-1.4
3,313,759	-		CCNA_03158	0.26	-0.1
3,313,796	-		CCNA_03158	0.30	+1.3
3,313,866	+		CCNA_03158	0.37	+1.2
3,313,947	+		CCNA_03158	0.46	+0.7
3,313,947	+		CCNA_03158	0.46	+0.5
3,314,000	+		CCNA_03158	0.51	+0.5
3,314,005	+		CCNA_03158	0.52	+1.2
3,314,017	+		CCNA_03158	0.53	+0.1
3,314,017	+		CCNA_03158	0.53	+0.1
3,314,028	+		CCNA_03158	0.54	+0.3
3,314,036	-		CCNA_03158	0.55	-1.2
3,314,078	+		CCNA_03158	0.59	+1.0
3,314,083	+		CCNA_03158	0.60	+0.7
3,314,083	+		CCNA_03158	0.60	-1.6
3,314,124	-		CCNA_03158	0.64	+2.1
3,314,210	-		CCNA_03158	0.73	-0.5
3,314,221	+		CCNA_03158	0.74	-0.5
3,314,235	+		CCNA_03158	0.76	+0.7
3,314,235	+		CCNA_03158	0.76	+0.4
3,314,239	+		CCNA_03158	0.76	+0.4
3,314,243	-		CCNA_03158	0.77	-1.5
3,314,272	-		CCNA_03158	0.80	+0.7
3,314,288	+		CCNA_03158	0.81	+1.3
3,314,288	+		CCNA_03158	0.81	+0.9
3,314,293	+		CCNA_03158	0.82	+0.9
3,314,294	+		CCNA_03158	0.82	+0.8
3,314,294	+		CCNA_03158	0.82	+0.8
3,314,323	+		CCNA_03158	0.85	+0.8
3,314,330	+		CCNA_03158	0.86	+0.6
3,314,330	+		CCNA_03158	0.86	+2.7
3,314,330	+		CCNA_03158	0.86	+0.4
3,314,403	+				+1.0
3,314,426	-				-1.8
3,314,442	+				+1.0
3,314,505	+				+0.8
3,314,513	-				-2.1
3,314,513	-				-2.4
3,314,522	+				+1.3
3,314,523	-				-0.0
3,314,530	-				-1.4
3,314,531	+				+1.0
3,314,536	+				+1.1
3,314,539	+				+0.1
3,314,549	-				+1.3
3,314,550	+				+0.3
3,314,560	-				-0.3
3,314,562	+				+0.8
3,314,569	+				+1.0
3,314,608	+				+0.7
3,314,659	-		CCNA_03159	0.13	+0.6
3,314,673	-		CCNA_03159	0.14	+0.2
3,314,681	-		CCNA_03159	0.14	+1.2
3,314,689	+		CCNA_03159	0.15	+0.5
3,314,696	-		CCNA_03159	0.15	+0.4
3,314,697	-		CCNA_03159	0.15	+0.6
3,314,723	+		CCNA_03159	0.17	+1.4
3,314,723	+		CCNA_03159	0.17	+1.1
3,314,731	-		CCNA_03159	0.18	+1.8
3,314,733	+		CCNA_03159	0.18	+1.1
3,314,741	-		CCNA_03159	0.18	-0.3
3,314,789	+		CCNA_03159	0.21	+0.6
3,314,789	+		CCNA_03159	0.21	+0.7
3,314,789	-		CCNA_03159	0.21	-0.2
3,314,852	+		CCNA_03159	0.26	+1.0
3,314,859	+		CCNA_03159	0.26	+1.2
3,314,859	+		CCNA_03159	0.26	+2.5
3,314,867	-		CCNA_03159	0.27	-1.8
3,314,867	-		CCNA_03159	0.27	+0.8
3,314,871	+		CCNA_03159	0.27	+0.8
3,314,871	+		CCNA_03159	0.27	+1.6
3,314,871	+		CCNA_03159	0.27	+1.5
3,314,874	-		CCNA_03159	0.27	-1.4
3,314,879	-		CCNA_03159	0.27	+1.5
3,314,879	-		CCNA_03159	0.27	-0.0
3,314,881	+		CCNA_03159	0.28	+0.9
3,314,906	+		CCNA_03159	0.29	+0.6
3,314,908	+		CCNA_03159	0.29	+1.0
3,314,908	+		CCNA_03159	0.29	+1.0
3,314,908	+		CCNA_03159	0.29	+0.3
3,314,921	+		CCNA_03159	0.30	+0.4
3,314,961	-		CCNA_03159	0.33	+0.2
3,314,973	+		CCNA_03159	0.34	-0.6
3,314,979	-		CCNA_03159	0.34	-0.1
3,314,981	-		CCNA_03159	0.34	+2.1
3,314,981	-		CCNA_03159	0.34	-0.0
3,315,023	+		CCNA_03159	0.37	-1.4
3,315,023	-		CCNA_03159	0.37	-0.1
3,315,031	-		CCNA_03159	0.37	+2.3
3,315,031	-		CCNA_03159	0.37	+1.2
3,315,031	-		CCNA_03159	0.37	+0.1
3,315,036	+		CCNA_03159	0.38	-0.2
3,315,041	-		CCNA_03159	0.38	+0.3
3,315,048	-		CCNA_03159	0.39	-0.4
3,315,048	-		CCNA_03159	0.39	-1.1
3,315,098	-		CCNA_03159	0.42	+0.1
3,315,144	+		CCNA_03159	0.45	+1.3
3,315,166	-		CCNA_03159	0.46	+1.1
3,315,176	-		CCNA_03159	0.47	+0.6
3,315,176	-		CCNA_03159	0.47	+0.8
3,315,205	-		CCNA_03159	0.49	-1.5
3,315,219	+		CCNA_03159	0.50	+0.9
3,315,253	+		CCNA_03159	0.52	-0.8
3,315,261	-		CCNA_03159	0.53	+0.1
3,315,301	-		CCNA_03159	0.55	-0.4
3,315,360	-		CCNA_03159	0.59	-1.8
3,315,381	-		CCNA_03159	0.61	-0.9
3,315,422	+		CCNA_03159	0.63	+0.8
3,315,475	+		CCNA_03159	0.67	-0.4
3,315,475	+		CCNA_03159	0.67	+1.5
3,315,499	+		CCNA_03159	0.68	-0.0
3,315,499	+		CCNA_03159	0.68	+0.9
3,315,507	-		CCNA_03159	0.69	+2.3
3,315,507	-		CCNA_03159	0.69	-0.2
3,315,507	-		CCNA_03159	0.69	-1.0
3,315,540	-		CCNA_03159	0.71	-2.1
3,315,553	-		CCNA_03159	0.72	+0.3
3,315,560	+		CCNA_03159	0.72	+0.1
3,315,564	-		CCNA_03159	0.73	-0.7
3,315,568	-		CCNA_03159	0.73	-1.6
3,315,598	+		CCNA_03159	0.75	+1.4
3,315,598	+		CCNA_03159	0.75	+0.2
3,315,599	-		CCNA_03159	0.75	-2.3
3,315,606	-		CCNA_03159	0.75	-1.6
3,315,606	-		CCNA_03159	0.75	+2.7
3,315,606	-		CCNA_03159	0.75	+0.3
3,315,610	-		CCNA_03159	0.76	+0.1
3,315,621	+		CCNA_03159	0.76	+0.6
3,315,627	+		CCNA_03159	0.77	+0.8
3,315,629	-		CCNA_03159	0.77	+1.0
3,315,629	-		CCNA_03159	0.77	+0.9
3,315,629	-		CCNA_03159	0.77	-0.5
3,315,629	-		CCNA_03159	0.77	+0.6
3,315,666	-		CCNA_03159	0.79	+0.6
3,315,702	-		CCNA_03159	0.82	+2.3
3,315,728	+		CCNA_03159	0.83	+0.7
3,315,736	-		CCNA_03159	0.84	-1.5
3,315,736	-		CCNA_03159	0.84	+1.1
3,315,759	-		CCNA_03159	0.85	+0.4
3,315,759	-		CCNA_03159	0.85	-1.0
3,315,783	+		CCNA_03159	0.87	+1.5
3,315,783	+		CCNA_03159	0.87	+1.2
3,315,783	+		CCNA_03159	0.87	+1.3
3,315,783	+		CCNA_03159	0.87	+0.9
3,315,783	+		CCNA_03159	0.87	+1.2
3,315,783	+		CCNA_03159	0.87	+1.3
3,315,788	+		CCNA_03159	0.87	+1.1
3,315,790	+		CCNA_03159	0.88	+1.0
3,315,790	+		CCNA_03159	0.88	+1.1
3,315,791	-				+0.0
3,315,791	-		CCNA_03159	0.88	+2.3
3,315,791	-		CCNA_03159	0.88	-1.3
3,315,791	-		CCNA_03159	0.88	+1.2
3,315,791	-		CCNA_03159	0.88	-1.5
3,315,791	-		CCNA_03159	0.88	-1.4
3,315,798	-		CCNA_03159	0.88	+1.5
3,315,828	-				+0.0
3,315,861	-				+0.5
3,315,899	-				+0.5
3,315,942	+				+0.8
3,315,972	+				+0.2
3,315,972	+				-0.5
3,315,978	-				-3.1
3,315,979	-				-2.1
3,316,002	+				-1.0
3,316,040	+				-1.9
3,316,048	-				+0.2
3,316,061	-				+0.2
3,316,098	+				-1.7
3,316,112	+				+0.0
3,316,130	+				+0.7
3,316,255	+		CCNA_03160	0.31	-2.2
3,316,255	+		CCNA_03160	0.31	+0.6
3,316,255	+		CCNA_03160	0.31	+0.3
3,316,273	+		CCNA_03160	0.34	-1.7
3,316,390	+		CCNA_03160	0.57	-0.5
3,316,396	-		CCNA_03160	0.58	-0.6
3,316,410	+		CCNA_03160	0.61	-2.0
3,316,447	+		CCNA_03160	0.68	-0.0
3,316,447	+		CCNA_03160	0.68	-0.2
3,316,447	+		CCNA_03160	0.68	-2.3
3,316,447	+		CCNA_03160	0.68	+0.0
3,316,455	-		CCNA_03160	0.70	-0.4
3,316,455	-		CCNA_03160	0.70	-1.0
3,316,512	+		CCNA_03160	0.81	+0.4
3,316,530	+		CCNA_03160	0.84	-1.0
3,316,545	-		CCNA_03160	0.87	-0.7
3,316,574	-				+1.1
3,316,615	-				-0.2
3,316,642	+				-2.6
3,316,650	-				-1.3
3,316,657	-				-3.0
3,316,663	+				+0.0
3,316,663	+				-2.9
3,316,663	+				-0.7
3,316,686	+				-0.3
3,316,688	-				-0.7
3,316,744	-				+1.3
3,316,823	+		CCNA_03161	0.12	-3.4
3,316,867	+		CCNA_03161	0.16	-1.7
3,316,868	-		CCNA_03161	0.16	-2.9
3,316,933	+		CCNA_03161	0.22	-2.6
3,316,941	-		CCNA_03161	0.23	+1.3
3,316,953	-		CCNA_03161	0.24	-0.3