Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02726

Experiment: PYE_noCalcium 25C survival rep2 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 25C survival rep2 12 days
2,888,334	+		CCNA_02725	0.60	-0.0
2,888,334	+		CCNA_02725	0.60	+0.7
2,888,334	+		CCNA_02725	0.60	+1.2
2,888,334	+		CCNA_02725	0.60	-2.9
2,888,337	-		CCNA_02725	0.60	+1.6
2,888,342	-		CCNA_02725	0.61	-0.8
2,888,342	-		CCNA_02725	0.61	-0.2
2,888,342	-		CCNA_02725	0.61	-0.3
2,888,347	-		CCNA_02725	0.61	-2.4
2,888,354	+		CCNA_02725	0.62	-0.3
2,888,354	+		CCNA_02725	0.62	-0.8
2,888,362	-		CCNA_02725	0.62	-0.1
2,888,362	-		CCNA_02725	0.62	-1.8
2,888,362	-		CCNA_02725	0.62	+0.1
2,888,369	+		CCNA_02725	0.62	+0.6
2,888,380	+		CCNA_02725	0.63	+2.6
2,888,380	+		CCNA_02725	0.63	+0.2
2,888,385	+		CCNA_02725	0.63	-0.6
2,888,388	-		CCNA_02725	0.64	+0.1
2,888,390	+		CCNA_02725	0.64	+1.0
2,888,398	-		CCNA_02725	0.64	-0.2
2,888,416	-		CCNA_02725	0.65	+0.6
2,888,416	-		CCNA_02725	0.65	+0.4
2,888,421	-		CCNA_02725	0.66	-0.3
2,888,440	+		CCNA_02725	0.67	-1.1
2,888,448	-		CCNA_02725	0.67	+2.1
2,888,448	-		CCNA_02725	0.67	+1.2
2,888,463	+		CCNA_02725	0.68	+0.6
2,888,483	+		CCNA_02725	0.69	-0.8
2,888,491	-		CCNA_02725	0.70	-0.0
2,888,505	-		CCNA_02725	0.71	-1.7
2,888,513	-		CCNA_02725	0.71	-2.0
2,888,528	-		CCNA_02725	0.72	+0.2
2,888,544	+		CCNA_02725	0.73	+1.4
2,888,552	-		CCNA_02725	0.73	-0.9
2,888,581	-		CCNA_02725	0.75	-0.4
2,888,622	-				-0.8
2,888,624	+		CCNA_02725	0.78	+1.0
2,888,624	+		CCNA_02725	0.78	-0.0
2,888,632	-		CCNA_02725	0.78	+0.4
2,888,640	-		CCNA_02725	0.79	-1.0
2,888,640	-		CCNA_02725	0.79	+0.1
2,888,651	+		CCNA_02725	0.79	-0.4
2,888,656	+		CCNA_02725	0.80	-1.4
2,888,664	-		CCNA_02725	0.80	-1.6
2,888,674	+		CCNA_02725	0.81	+1.3
2,888,674	+		CCNA_02725	0.81	+0.2
2,888,674	+		CCNA_02725	0.81	+0.6
2,888,674	+		CCNA_02725	0.81	-1.3
2,888,682	-		CCNA_02725	0.81	-1.8
2,888,682	-		CCNA_02725	0.81	-1.6
2,888,682	-		CCNA_02725	0.81	-2.2
2,888,737	+		CCNA_02725	0.84	-1.3
2,888,740	-		CCNA_02725	0.85	-0.0
2,888,740	-		CCNA_02725	0.85	-2.5
2,888,740	-		CCNA_02725	0.85	-0.6
2,888,740	-		CCNA_02725	0.85	-0.6
2,888,760	+		CCNA_02725	0.86	-1.4
2,888,762	-		CCNA_02725	0.86	-1.9
2,888,769	-		CCNA_02725	0.86	-0.5
2,888,771	+		CCNA_02725	0.87	-0.3
2,888,776	+		CCNA_02725	0.87	+0.6
2,888,779	-		CCNA_02725	0.87	-1.0
2,888,784	-		CCNA_02725	0.87	-0.5
2,888,802	+		CCNA_02725	0.88	+0.2
2,888,802	+		CCNA_02725	0.88	+0.4
2,888,810	-		CCNA_02725	0.89	+2.6
2,888,815	-		CCNA_02725	0.89	-1.1
2,888,817	+		CCNA_02725	0.89	-0.5
2,888,817	+		CCNA_02725	0.89	-1.8
2,888,825	-		CCNA_02725	0.90	-0.9
2,888,825	-		CCNA_02725	0.90	-0.4
2,888,836	+				+1.3
2,888,844	-				+0.5
2,888,863	+				+1.6
2,888,909	-				-1.8
2,888,909	-				+0.2
2,888,928	+				-3.2
2,888,998	-				+0.2
2,889,026	-				+0.9
2,889,049	+				-0.1
2,889,049	+				+0.3
2,889,049	+				-1.4
2,889,049	+				+0.7
2,889,049	+				+0.2
2,889,049	+				-0.0
2,889,049	+				-0.4
2,889,052	-				-1.1
2,889,057	-				-0.4
2,889,057	-				+2.4
2,889,087	+				-1.0
2,889,194	-				-0.2
2,889,216	+				-1.3
2,889,246	+				+2.6
2,889,256	+				-1.5
2,889,264	-				-0.2
2,889,276	+				+1.0
2,889,282	-				-1.1
2,889,306	-				-0.3
2,889,338	+				+0.2
2,889,338	+				-1.8
2,889,338	+				-1.1
2,889,338	+				+0.6
2,889,345	+		CCNA_02726	0.11	-0.6
2,889,346	-		CCNA_02726	0.11	-2.5
2,889,346	-		CCNA_02726	0.11	-1.5
2,889,346	-		CCNA_02726	0.11	-1.8
2,889,346	-		CCNA_02726	0.11	-0.4
2,889,346	-		CCNA_02726	0.11	-3.3
2,889,346	-		CCNA_02726	0.11	-1.9
2,889,346	-		CCNA_02726	0.11	+0.6
2,889,346	-		CCNA_02726	0.11	-1.8
2,889,346	-		CCNA_02726	0.11	-1.2
2,889,346	-		CCNA_02726	0.11	-0.0
2,889,346	-		CCNA_02726	0.11	-2.6
2,889,350	+		CCNA_02726	0.12	-0.1
2,889,350	+		CCNA_02726	0.12	-2.1
2,889,358	+		CCNA_02726	0.13	-0.9
2,889,366	-		CCNA_02726	0.15	-2.2
2,889,373	-		CCNA_02726	0.16	-1.3
2,889,393	+		CCNA_02726	0.20	+1.6
2,889,408	+		CCNA_02726	0.23	-1.5
2,889,415	+		CCNA_02726	0.24	-1.2
2,889,416	-		CCNA_02726	0.24	-2.1
2,889,435	+		CCNA_02726	0.28	-0.6
2,889,443	-		CCNA_02726	0.29	-1.7
2,889,443	-		CCNA_02726	0.29	-0.7
2,889,443	-		CCNA_02726	0.29	-2.2
2,889,443	-		CCNA_02726	0.29	-1.3
2,889,443	-		CCNA_02726	0.29	-1.5
2,889,443	-		CCNA_02726	0.29	-0.2
2,889,443	-		CCNA_02726	0.29	-0.6
2,889,444	-		CCNA_02726	0.30	-0.2
2,889,484	-		CCNA_02726	0.37	-1.9
2,889,484	-		CCNA_02726	0.37	-0.6
2,889,488	-		CCNA_02726	0.38	-3.1
2,889,497	+		CCNA_02726	0.40	-2.0
2,889,505	-		CCNA_02726	0.41	+0.0
2,889,505	-		CCNA_02726	0.41	-0.8
2,889,511	+		CCNA_02726	0.42	-0.8
2,889,511	+		CCNA_02726	0.42	+1.6
2,889,519	-		CCNA_02726	0.44	-1.0
2,889,533	+		CCNA_02726	0.46	-0.1
2,889,548	+		CCNA_02726	0.49	+0.6
2,889,548	+		CCNA_02726	0.49	-0.9
2,889,556	+		CCNA_02726	0.51	+2.6
2,889,556	+		CCNA_02726	0.51	-0.8
2,889,556	-		CCNA_02726	0.51	-1.7
2,889,566	-		CCNA_02726	0.53	-3.1
2,889,593	+		CCNA_02726	0.58	-0.4
2,889,593	+		CCNA_02726	0.58	-0.2
2,889,593	+		CCNA_02726	0.58	-0.1
2,889,593	+		CCNA_02726	0.58	+0.6
2,889,593	+		CCNA_02726	0.58	-0.6
2,889,601	-		CCNA_02726	0.59	-0.9
2,889,601	-				-0.6
2,889,601	-		CCNA_02726	0.59	-1.9
2,889,601	-		CCNA_02726	0.59	-1.6
2,889,601	-		CCNA_02726	0.59	-0.2
2,889,613	-		CCNA_02726	0.61	-0.0
2,889,613	-		CCNA_02726	0.61	-0.4
2,889,630	-		CCNA_02726	0.65	-1.1
2,889,630	-		CCNA_02726	0.65	-0.8
2,889,630	-		CCNA_02726	0.65	-0.2
2,889,632	+		CCNA_02726	0.65	+2.6
2,889,632	+		CCNA_02726	0.65	-1.3
2,889,632	+		CCNA_02726	0.65	+1.0
2,889,640	-		CCNA_02726	0.66	+0.1
2,889,640	-		CCNA_02726	0.66	-3.3
2,889,647	-		CCNA_02726	0.68	-0.6
2,889,693	-		CCNA_02726	0.76	-1.0
2,889,764	-		CCNA_02726	0.90	+0.6
2,889,803	+				-1.0
2,889,812	-				-0.2
2,889,821	-				+0.2
2,889,945	-				-0.0
2,889,959	+				+0.8
2,889,996	-				+0.7
2,890,016	-		CCNA_03973	0.12	-2.5
2,890,018	-		CCNA_03973	0.13	-0.4
2,890,018	-		CCNA_03973	0.13	-2.0
2,890,044	-		CCNA_03973	0.30	+0.8
2,890,100	-		CCNA_03973	0.65	+0.2
2,890,104	+		CCNA_03973	0.67	+0.9
2,890,105	+		CCNA_03973	0.68	+0.0
2,890,192	+				-1.0
2,890,200	-				-0.6
2,890,204	-				-0.4
2,890,263	+		CCNA_02727	0.15	+0.1
2,890,263	+		CCNA_02727	0.15	+0.7
2,890,263	+		CCNA_02727	0.15	+0.4
2,890,263	+		CCNA_02727	0.15	-2.1
2,890,263	+		CCNA_02727	0.15	-1.9
2,890,263	+		CCNA_02727	0.15	-0.7
2,890,271	-		CCNA_02727	0.16	-0.8
2,890,274	+		CCNA_02727	0.17	-1.5
2,890,277	-		CCNA_02727	0.17	+1.1
2,890,281	+		CCNA_02727	0.17	-1.9
2,890,282	-		CCNA_02727	0.18	+0.1
2,890,287	+		CCNA_02727	0.18	-1.6
2,890,297	+		CCNA_02727	0.20	-0.7
2,890,302	+		CCNA_02727	0.20	-2.2
2,890,305	-		CCNA_02727	0.21	-0.2
2,890,315	-		CCNA_02727	0.22	-0.0
2,890,328	+		CCNA_02727	0.23	+1.2
2,890,355	+		CCNA_02727	0.27	-0.7
2,890,355	+		CCNA_02727	0.27	-1.3
2,890,363	-		CCNA_02727	0.28	+1.6
2,890,389	+		CCNA_02727	0.31	-0.8
2,890,389	+		CCNA_02727	0.31	-0.1
2,890,397	-		CCNA_02727	0.32	-0.4
2,890,398	-		CCNA_02727	0.32	-0.6
2,890,403	-		CCNA_02727	0.33	-1.6
2,890,405	+		CCNA_02727	0.33	+1.1
2,890,423	-		CCNA_02727	0.35	+2.6
2,890,430	+		CCNA_02727	0.36	+1.1
2,890,430	+		CCNA_02727	0.36	-1.6
2,890,430	+		CCNA_02727	0.36	-0.2
2,890,430	+		CCNA_02727	0.36	-0.3
2,890,430	+		CCNA_02727	0.36	-0.8
2,890,430	+		CCNA_02727	0.36	-3.0
2,890,430	+		CCNA_02727	0.36	-0.1
2,890,430	+		CCNA_02727	0.36	+0.0
2,890,430	+		CCNA_02727	0.36	-0.5
2,890,438	-		CCNA_02727	0.37	+1.6
2,890,438	-		CCNA_02727	0.37	-0.3
2,890,438	-		CCNA_02727	0.37	-0.8
2,890,438	-		CCNA_02727	0.37	-1.2
2,890,438	-		CCNA_02727	0.37	-0.9
2,890,456	-		CCNA_02727	0.40	-0.5
2,890,489	-		CCNA_02727	0.44	+0.4
2,890,551	+		CCNA_02727	0.52	-0.9
2,890,568	+		CCNA_02727	0.54	-1.0
2,890,575	+		CCNA_02727	0.55	+0.4
2,890,646	+		CCNA_02727	0.64	+0.7
2,890,668	+		CCNA_02727	0.67	-0.2
2,890,668	+		CCNA_02727	0.67	+1.0
2,890,671	-		CCNA_02727	0.67	-0.7
2,890,676	-		CCNA_02727	0.68	-0.2
2,890,701	+		CCNA_02727	0.71	+1.2
2,890,706	+		CCNA_02727	0.71	+1.8
2,890,709	-		CCNA_02727	0.72	-2.0
2,890,709	-		CCNA_02727	0.72	+2.6
2,890,709	-		CCNA_02727	0.72	+0.7
2,890,709	-		CCNA_02727	0.72	-0.6
2,890,714	-		CCNA_02727	0.72	+0.1
2,890,722	+		CCNA_02727	0.73	+0.3
2,890,724	+		CCNA_02727	0.74	-0.4
2,890,780	+		CCNA_02727	0.81	+1.0
2,890,788	-		CCNA_02727	0.82	-0.0
2,890,788	-		CCNA_02727	0.82	+0.6
2,890,788	-		CCNA_02727	0.82	+1.6
2,890,805	-		CCNA_02727	0.84	+2.6