Experiment: 3-Hydroxypropionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04526 and H281DRAFT_04527 are separated by 213 nucleotides H281DRAFT_04527 and H281DRAFT_04528 overlap by 4 nucleotides H281DRAFT_04528 and H281DRAFT_04529 overlap by 4 nucleotides H281DRAFT_04529 and H281DRAFT_04530 are separated by 82 nucleotides
H281DRAFT_04526: H281DRAFT_04526 - NADPH2:quinone reductase, at 257,492 to 258,466
_04526
H281DRAFT_04527: H281DRAFT_04527 - hypothetical protein, at 258,680 to 258,793
_04527
H281DRAFT_04528: H281DRAFT_04528 - K+-transporting ATPase, KdpF subunit, at 258,790 to 258,882
_04528
H281DRAFT_04529: H281DRAFT_04529 - K+-transporting ATPase ATPase A chain, at 258,879 to 260,684
_04529
H281DRAFT_04530: H281DRAFT_04530 - K+-transporting ATPase ATPase B chain, at 260,767 to 262,863
_04530
Position (kb) 258
259
260
261 Strain fitness (log2 ratio) -1
0
1 at 257.895 kb on - strand, within H281DRAFT_04526 at 258.062 kb on + strand, within H281DRAFT_04526 at 258.062 kb on + strand, within H281DRAFT_04526 at 258.063 kb on - strand, within H281DRAFT_04526 at 258.065 kb on - strand, within H281DRAFT_04526 at 258.065 kb on - strand, within H281DRAFT_04526 at 258.148 kb on + strand, within H281DRAFT_04526 at 258.148 kb on + strand, within H281DRAFT_04526 at 258.294 kb on - strand, within H281DRAFT_04526 at 258.294 kb on - strand, within H281DRAFT_04526 at 258.294 kb on - strand, within H281DRAFT_04526 at 258.402 kb on + strand at 258.516 kb on - strand at 258.639 kb on + strand at 258.890 kb on + strand at 259.072 kb on - strand, within H281DRAFT_04529 at 259.240 kb on - strand, within H281DRAFT_04529 at 259.413 kb on + strand, within H281DRAFT_04529 at 259.488 kb on + strand, within H281DRAFT_04529 at 259.488 kb on + strand, within H281DRAFT_04529 at 259.491 kb on - strand, within H281DRAFT_04529 at 259.491 kb on - strand, within H281DRAFT_04529 at 259.491 kb on - strand, within H281DRAFT_04529 at 259.521 kb on + strand, within H281DRAFT_04529 at 259.522 kb on - strand, within H281DRAFT_04529 at 260.368 kb on - strand, within H281DRAFT_04529 at 260.436 kb on + strand, within H281DRAFT_04529 at 260.437 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-Hydroxypropionate (C) remove 257,895 - H281DRAFT_04526 0.41 -1.5 258,062 + H281DRAFT_04526 0.58 +0.5 258,062 + H281DRAFT_04526 0.58 -0.6 258,063 - H281DRAFT_04526 0.59 +0.0 258,065 - H281DRAFT_04526 0.59 +0.2 258,065 - H281DRAFT_04526 0.59 -0.4 258,148 + H281DRAFT_04526 0.67 -0.1 258,148 + H281DRAFT_04526 0.67 -0.1 258,294 - H281DRAFT_04526 0.82 -0.0 258,294 - H281DRAFT_04526 0.82 -0.9 258,294 - H281DRAFT_04526 0.82 +0.8 258,402 + +0.6 258,516 - -0.1 258,639 + -0.3 258,890 + -0.6 259,072 - H281DRAFT_04529 0.11 -0.3 259,240 - H281DRAFT_04529 0.20 -0.7 259,413 + H281DRAFT_04529 0.30 +0.2 259,488 + H281DRAFT_04529 0.34 -0.1 259,488 + H281DRAFT_04529 0.34 +0.6 259,491 - H281DRAFT_04529 0.34 -1.2 259,491 - H281DRAFT_04529 0.34 -0.2 259,491 - H281DRAFT_04529 0.34 +0.1 259,521 + H281DRAFT_04529 0.36 +0.2 259,522 - H281DRAFT_04529 0.36 +0.4 260,368 - H281DRAFT_04529 0.82 -0.4 260,436 + H281DRAFT_04529 0.86 +0.2 260,437 - +1.2
Or see this region's nucleotide sequence