Experiment: 3-Hydroxypropionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03271 and H281DRAFT_03272 are separated by 377 nucleotides H281DRAFT_03272 and H281DRAFT_03273 are separated by 108 nucleotides H281DRAFT_03273 and H281DRAFT_03274 overlap by 4 nucleotides H281DRAFT_03274 and H281DRAFT_03275 are separated by 144 nucleotides
H281DRAFT_03271: H281DRAFT_03271 - hypothetical protein, at 329,783 to 329,995
_03271
H281DRAFT_03272: H281DRAFT_03272 - Uncharacterized conserved protein YjbJ, UPF0337 family, at 330,373 to 330,657
_03272
H281DRAFT_03273: H281DRAFT_03273 - Uncharacterized membrane protein YqjE, at 330,766 to 331,140
_03273
H281DRAFT_03274: H281DRAFT_03274 - hypothetical protein, at 331,137 to 331,439
_03274
H281DRAFT_03275: H281DRAFT_03275 - Threonine dehydrogenase, at 331,584 to 332,753
_03275
Position (kb) 330
331
332 Strain fitness (log2 ratio) -2
-1
0
1 at 329.934 kb on + strand, within H281DRAFT_03271 at 329.934 kb on + strand, within H281DRAFT_03271 at 329.935 kb on - strand, within H281DRAFT_03271 at 330.034 kb on + strand at 330.052 kb on + strand at 330.083 kb on + strand at 330.147 kb on + strand at 330.159 kb on - strand at 330.345 kb on + strand at 330.411 kb on - strand, within H281DRAFT_03272 at 330.773 kb on + strand at 330.773 kb on + strand at 330.774 kb on - strand at 330.777 kb on + strand at 330.982 kb on + strand, within H281DRAFT_03273 at 330.983 kb on - strand, within H281DRAFT_03273 at 331.309 kb on - strand, within H281DRAFT_03274 at 331.557 kb on - strand at 331.581 kb on + strand at 331.581 kb on + strand at 331.581 kb on + strand at 331.582 kb on - strand at 331.582 kb on - strand at 331.583 kb on + strand at 331.583 kb on + strand at 331.583 kb on + strand at 331.583 kb on + strand at 331.583 kb on + strand at 331.679 kb on - strand at 331.679 kb on - strand at 331.694 kb on - strand at 331.770 kb on - strand, within H281DRAFT_03275 at 331.905 kb on - strand, within H281DRAFT_03275
Per-strain Table
Position Strand Gene LocusTag Fraction 3-Hydroxypropionate (C) remove 329,934 + H281DRAFT_03271 0.71 -0.4 329,934 + H281DRAFT_03271 0.71 +0.7 329,935 - H281DRAFT_03271 0.71 +0.1 330,034 + +0.5 330,052 + -0.7 330,083 + -0.1 330,147 + +0.1 330,159 - +0.3 330,345 + +0.4 330,411 - H281DRAFT_03272 0.13 -0.5 330,773 + -0.0 330,773 + +0.1 330,774 - -0.3 330,777 + +0.3 330,982 + H281DRAFT_03273 0.58 +0.7 330,983 - H281DRAFT_03273 0.58 +0.7 331,309 - H281DRAFT_03274 0.57 +0.2 331,557 - +0.4 331,581 + +0.2 331,581 + +0.4 331,581 + +0.2 331,582 - +0.2 331,582 - -0.3 331,583 + -0.4 331,583 + -0.1 331,583 + -0.8 331,583 + -0.1 331,583 + -1.2 331,679 - -1.4 331,679 - -1.8 331,694 - -0.3 331,770 - H281DRAFT_03275 0.16 -0.4 331,905 - H281DRAFT_03275 0.27 +0.0
Or see this region's nucleotide sequence