Experiment: 3-Hydroxypropionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02672 and H281DRAFT_02673 are separated by 112 nucleotides H281DRAFT_02673 and H281DRAFT_02674 are separated by 30 nucleotides H281DRAFT_02674 and H281DRAFT_02675 are separated by 19 nucleotides
H281DRAFT_02672: H281DRAFT_02672 - 3-oxoadipate enol-lactonase, at 252,403 to 253,197
_02672
H281DRAFT_02673: H281DRAFT_02673 - Carbon monoxide dehydrogenase subunit G, at 253,310 to 254,056
_02673
H281DRAFT_02674: H281DRAFT_02674 - carbon-monoxide dehydrogenase medium subunit, at 254,087 to 254,968
_02674
H281DRAFT_02675: H281DRAFT_02675 - carbon-monoxide dehydrogenase small subunit, at 254,988 to 255,509
_02675
Position (kb) 253
254
255 Strain fitness (log2 ratio) -2
-1
0
1 at 252.395 kb on + strand at 252.449 kb on - strand at 252.547 kb on + strand, within H281DRAFT_02672 at 252.547 kb on + strand, within H281DRAFT_02672 at 252.547 kb on + strand, within H281DRAFT_02672 at 252.548 kb on - strand, within H281DRAFT_02672 at 252.548 kb on - strand, within H281DRAFT_02672 at 252.548 kb on - strand, within H281DRAFT_02672 at 253.445 kb on + strand, within H281DRAFT_02673 at 253.445 kb on + strand, within H281DRAFT_02673 at 253.683 kb on - strand, within H281DRAFT_02673 at 254.108 kb on + strand at 254.504 kb on + strand, within H281DRAFT_02674 at 254.505 kb on - strand, within H281DRAFT_02674 at 254.505 kb on - strand, within H281DRAFT_02674 at 254.536 kb on - strand, within H281DRAFT_02674 at 254.561 kb on + strand, within H281DRAFT_02674 at 254.561 kb on + strand, within H281DRAFT_02674 at 254.562 kb on - strand, within H281DRAFT_02674
Per-strain Table
Position Strand Gene LocusTag Fraction 3-Hydroxypropionate (C) remove 252,395 + +0.4 252,449 - +0.4 252,547 + H281DRAFT_02672 0.18 -0.2 252,547 + H281DRAFT_02672 0.18 +0.5 252,547 + H281DRAFT_02672 0.18 +0.1 252,548 - H281DRAFT_02672 0.18 +0.6 252,548 - H281DRAFT_02672 0.18 +0.0 252,548 - H281DRAFT_02672 0.18 -2.4 253,445 + H281DRAFT_02673 0.18 +0.6 253,445 + H281DRAFT_02673 0.18 +0.5 253,683 - H281DRAFT_02673 0.50 +0.4 254,108 + -0.4 254,504 + H281DRAFT_02674 0.47 -0.2 254,505 - H281DRAFT_02674 0.47 -0.5 254,505 - H281DRAFT_02674 0.47 -0.4 254,536 - H281DRAFT_02674 0.51 -1.2 254,561 + H281DRAFT_02674 0.54 +0.6 254,561 + H281DRAFT_02674 0.54 -0.0 254,562 - H281DRAFT_02674 0.54 +0.7
Or see this region's nucleotide sequence