Experiment: 3-Hydroxypropionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02364 and H281DRAFT_02365 are separated by 195 nucleotides H281DRAFT_02365 and H281DRAFT_02366 are separated by 276 nucleotides H281DRAFT_02366 and H281DRAFT_02367 are separated by 63 nucleotides
H281DRAFT_02364: H281DRAFT_02364 - GMP synthase (glutamine-hydrolysing), at 525,799 to 526,512
_02364
H281DRAFT_02365: H281DRAFT_02365 - 2,4-dienoyl-CoA reductase, at 526,708 to 527,820
_02365
H281DRAFT_02366: H281DRAFT_02366 - hypothetical protein, at 528,097 to 528,627
_02366
H281DRAFT_02367: H281DRAFT_02367 - Signal transduction histidine kinase, at 528,691 to 530,193
_02367
Position (kb) 526
527
528 Strain fitness (log2 ratio) -1
0
1
2 at 525.832 kb on + strand at 525.832 kb on + strand at 525.832 kb on + strand at 525.833 kb on - strand at 526.053 kb on + strand, within H281DRAFT_02364 at 526.053 kb on + strand, within H281DRAFT_02364 at 526.230 kb on + strand, within H281DRAFT_02364 at 526.230 kb on + strand, within H281DRAFT_02364 at 526.230 kb on + strand, within H281DRAFT_02364 at 526.231 kb on - strand, within H281DRAFT_02364 at 526.668 kb on + strand at 526.669 kb on - strand at 526.669 kb on - strand at 526.669 kb on - strand at 526.691 kb on + strand at 526.741 kb on - strand at 526.809 kb on + strand at 526.848 kb on - strand, within H281DRAFT_02365 at 526.906 kb on - strand, within H281DRAFT_02365 at 526.926 kb on - strand, within H281DRAFT_02365 at 527.303 kb on - strand, within H281DRAFT_02365 at 527.689 kb on + strand, within H281DRAFT_02365 at 527.941 kb on - strand at 527.941 kb on - strand at 527.941 kb on - strand at 528.243 kb on + strand, within H281DRAFT_02366 at 528.271 kb on + strand, within H281DRAFT_02366 at 528.272 kb on - strand, within H281DRAFT_02366 at 528.388 kb on + strand, within H281DRAFT_02366 at 528.388 kb on + strand, within H281DRAFT_02366 at 528.388 kb on + strand, within H281DRAFT_02366 at 528.389 kb on - strand, within H281DRAFT_02366 at 528.389 kb on - strand, within H281DRAFT_02366 at 528.389 kb on - strand, within H281DRAFT_02366 at 528.440 kb on - strand, within H281DRAFT_02366 at 528.449 kb on + strand, within H281DRAFT_02366 at 528.449 kb on + strand, within H281DRAFT_02366 at 528.450 kb on - strand, within H281DRAFT_02366 at 528.487 kb on + strand, within H281DRAFT_02366 at 528.579 kb on + strand at 528.626 kb on - strand at 528.626 kb on - strand at 528.692 kb on + strand at 528.692 kb on + strand at 528.692 kb on + strand at 528.692 kb on + strand at 528.692 kb on + strand at 528.692 kb on + strand at 528.692 kb on + strand at 528.692 kb on + strand at 528.692 kb on + strand at 528.692 kb on + strand at 528.693 kb on - strand at 528.693 kb on - strand at 528.693 kb on - strand at 528.693 kb on - strand at 528.693 kb on - strand at 528.693 kb on - strand at 528.693 kb on - strand at 528.693 kb on - strand at 528.693 kb on - strand at 528.693 kb on - strand at 528.693 kb on - strand at 528.693 kb on - strand at 528.693 kb on - strand at 528.696 kb on + strand at 528.696 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-Hydroxypropionate (C) remove 525,832 + -0.2 525,832 + +0.5 525,832 + -0.1 525,833 - +0.2 526,053 + H281DRAFT_02364 0.36 +0.0 526,053 + H281DRAFT_02364 0.36 +0.6 526,230 + H281DRAFT_02364 0.60 -0.1 526,230 + H281DRAFT_02364 0.60 -0.2 526,230 + H281DRAFT_02364 0.60 -0.8 526,231 - H281DRAFT_02364 0.61 +0.1 526,668 + +0.1 526,669 - -0.3 526,669 - -0.3 526,669 - -0.3 526,691 + +0.1 526,741 - +0.7 526,809 + +0.9 526,848 - H281DRAFT_02365 0.13 +0.0 526,906 - H281DRAFT_02365 0.18 -0.6 526,926 - H281DRAFT_02365 0.20 +0.9 527,303 - H281DRAFT_02365 0.53 +0.7 527,689 + H281DRAFT_02365 0.88 +1.3 527,941 - -0.2 527,941 - -0.2 527,941 - +0.1 528,243 + H281DRAFT_02366 0.27 -1.7 528,271 + H281DRAFT_02366 0.33 +0.1 528,272 - H281DRAFT_02366 0.33 +0.2 528,388 + H281DRAFT_02366 0.55 +0.2 528,388 + H281DRAFT_02366 0.55 -0.9 528,388 + H281DRAFT_02366 0.55 -0.4 528,389 - H281DRAFT_02366 0.55 -0.2 528,389 - H281DRAFT_02366 0.55 +0.6 528,389 - H281DRAFT_02366 0.55 -0.1 528,440 - H281DRAFT_02366 0.65 +0.4 528,449 + H281DRAFT_02366 0.66 -0.2 528,449 + H281DRAFT_02366 0.66 +0.2 528,450 - H281DRAFT_02366 0.66 -0.3 528,487 + H281DRAFT_02366 0.73 +0.2 528,579 + +0.4 528,626 - +1.8 528,626 - -0.5 528,692 + -0.1 528,692 + -1.1 528,692 + +0.2 528,692 + +0.2 528,692 + +0.5 528,692 + +0.6 528,692 + +0.7 528,692 + -0.1 528,692 + -0.5 528,692 + +1.1 528,693 - +0.7 528,693 - -0.3 528,693 - +0.2 528,693 - -0.2 528,693 - -0.4 528,693 - +0.9 528,693 - -0.1 528,693 - +0.3 528,693 - -0.3 528,693 - +1.4 528,693 - -0.9 528,693 - +0.3 528,693 - +1.4 528,696 + +0.0 528,696 + +0.1
Or see this region's nucleotide sequence