Experiment: 3-Hydroxypropionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00962 and H281DRAFT_00963 are separated by 223 nucleotides H281DRAFT_00963 and H281DRAFT_00964 are separated by 171 nucleotides H281DRAFT_00964 and H281DRAFT_00965 are separated by 382 nucleotides
H281DRAFT_00962: H281DRAFT_00962 - UDP-glucose pyrophosphorylase, at 1,075,149 to 1,076,075
_00962
H281DRAFT_00963: H281DRAFT_00963 - malate synthase, at 1,076,299 to 1,078,470
_00963
H281DRAFT_00964: H281DRAFT_00964 - glc operon protein GlcG, at 1,078,642 to 1,079,046
_00964
H281DRAFT_00965: H281DRAFT_00965 - hypothetical protein, at 1,079,429 to 1,080,313
_00965
Position (kb)
1076
1077
1078
1079 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1075.337 kb on + strand, within H281DRAFT_00962 at 1075.338 kb on - strand, within H281DRAFT_00962 at 1075.452 kb on + strand, within H281DRAFT_00962 at 1075.771 kb on - strand, within H281DRAFT_00962 at 1075.799 kb on + strand, within H281DRAFT_00962 at 1075.887 kb on + strand, within H281DRAFT_00962 at 1076.007 kb on + strand at 1076.008 kb on - strand at 1076.008 kb on - strand at 1076.008 kb on - strand at 1076.008 kb on - strand at 1076.348 kb on + strand at 1076.436 kb on - strand at 1076.526 kb on - strand, within H281DRAFT_00963 at 1076.556 kb on + strand, within H281DRAFT_00963 at 1077.305 kb on + strand, within H281DRAFT_00963 at 1077.306 kb on - strand, within H281DRAFT_00963 at 1077.383 kb on - strand, within H281DRAFT_00963 at 1077.383 kb on - strand, within H281DRAFT_00963 at 1077.482 kb on - strand, within H281DRAFT_00963 at 1077.482 kb on - strand, within H281DRAFT_00963 at 1077.512 kb on + strand, within H281DRAFT_00963 at 1077.609 kb on - strand, within H281DRAFT_00963 at 1077.768 kb on + strand, within H281DRAFT_00963 at 1077.960 kb on - strand, within H281DRAFT_00963 at 1078.200 kb on + strand, within H281DRAFT_00963 at 1078.203 kb on - strand, within H281DRAFT_00963 at 1078.203 kb on - strand, within H281DRAFT_00963 at 1078.237 kb on + strand, within H281DRAFT_00963 at 1078.238 kb on - strand, within H281DRAFT_00963 at 1078.238 kb on - strand, within H281DRAFT_00963 at 1078.824 kb on - strand, within H281DRAFT_00964 at 1078.880 kb on + strand, within H281DRAFT_00964 at 1078.881 kb on - strand, within H281DRAFT_00964 at 1078.881 kb on - strand, within H281DRAFT_00964 at 1079.150 kb on - strand at 1079.150 kb on - strand at 1079.150 kb on - strand at 1079.340 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-Hydroxypropionate (C) remove 1,075,337 + H281DRAFT_00962 0.20 +0.7 1,075,338 - H281DRAFT_00962 0.20 +0.2 1,075,452 + H281DRAFT_00962 0.33 +0.1 1,075,771 - H281DRAFT_00962 0.67 -0.2 1,075,799 + H281DRAFT_00962 0.70 +0.5 1,075,887 + H281DRAFT_00962 0.80 +0.7 1,076,007 + -1.5 1,076,008 - -0.6 1,076,008 - +0.7 1,076,008 - +0.4 1,076,008 - +0.7 1,076,348 + +0.3 1,076,436 - -1.1 1,076,526 - H281DRAFT_00963 0.10 -2.3 1,076,556 + H281DRAFT_00963 0.12 -0.8 1,077,305 + H281DRAFT_00963 0.46 -1.5 1,077,306 - H281DRAFT_00963 0.46 -2.0 1,077,383 - H281DRAFT_00963 0.50 -1.2 1,077,383 - H281DRAFT_00963 0.50 -1.9 1,077,482 - H281DRAFT_00963 0.54 -1.7 1,077,482 - H281DRAFT_00963 0.54 -1.9 1,077,512 + H281DRAFT_00963 0.56 -1.1 1,077,609 - H281DRAFT_00963 0.60 -1.1 1,077,768 + H281DRAFT_00963 0.68 -0.3 1,077,960 - H281DRAFT_00963 0.76 -2.6 1,078,200 + H281DRAFT_00963 0.88 -1.7 1,078,203 - H281DRAFT_00963 0.88 -2.9 1,078,203 - H281DRAFT_00963 0.88 -1.5 1,078,237 + H281DRAFT_00963 0.89 -1.2 1,078,238 - H281DRAFT_00963 0.89 -0.5 1,078,238 - H281DRAFT_00963 0.89 -1.9 1,078,824 - H281DRAFT_00964 0.45 +0.6 1,078,880 + H281DRAFT_00964 0.59 -0.9 1,078,881 - H281DRAFT_00964 0.59 +0.8 1,078,881 - H281DRAFT_00964 0.59 +1.0 1,079,150 - +1.6 1,079,150 - +1.1 1,079,150 - +1.3 1,079,340 + +0.5
Or see this region's nucleotide sequence