Experiment: 3-Hydroxypropionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00225 and H281DRAFT_00226 are separated by 215 nucleotides H281DRAFT_00226 and H281DRAFT_00227 are separated by 220 nucleotides H281DRAFT_00227 and H281DRAFT_00228 overlap by 17 nucleotides
H281DRAFT_00225: H281DRAFT_00225 - hypothetical protein, at 244,802 to 245,512
_00225
H281DRAFT_00226: H281DRAFT_00226 - Heavy-metal resistance, at 245,728 to 246,264
_00226
H281DRAFT_00227: H281DRAFT_00227 - two component transcriptional regulator, winged helix family, at 246,485 to 247,210
_00227
H281DRAFT_00228: H281DRAFT_00228 - two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ, at 247,194 to 248,510
_00228
Position (kb) 245
246
247 Strain fitness (log2 ratio) -1
0
1
2 at 244.763 kb on + strand at 244.763 kb on + strand at 244.764 kb on - strand at 244.764 kb on - strand at 244.796 kb on + strand at 244.887 kb on - strand, within H281DRAFT_00225 at 244.997 kb on - strand, within H281DRAFT_00225 at 244.997 kb on - strand, within H281DRAFT_00225 at 244.997 kb on - strand, within H281DRAFT_00225 at 245.000 kb on + strand, within H281DRAFT_00225 at 245.000 kb on + strand, within H281DRAFT_00225 at 245.000 kb on + strand, within H281DRAFT_00225 at 245.000 kb on + strand, within H281DRAFT_00225 at 245.000 kb on + strand, within H281DRAFT_00225 at 245.000 kb on + strand, within H281DRAFT_00225 at 245.001 kb on - strand, within H281DRAFT_00225 at 245.001 kb on - strand, within H281DRAFT_00225 at 245.443 kb on + strand at 245.444 kb on - strand at 245.444 kb on - strand at 245.541 kb on + strand at 245.612 kb on + strand at 245.612 kb on + strand at 245.729 kb on + strand at 245.730 kb on - strand at 245.876 kb on + strand, within H281DRAFT_00226 at 245.876 kb on + strand, within H281DRAFT_00226 at 245.877 kb on - strand, within H281DRAFT_00226 at 245.877 kb on - strand at 245.877 kb on - strand at 246.192 kb on - strand, within H281DRAFT_00226 at 246.342 kb on - strand at 246.366 kb on + strand at 246.366 kb on + strand at 246.367 kb on - strand at 246.367 kb on - strand at 246.398 kb on - strand at 246.398 kb on - strand at 246.416 kb on - strand at 246.498 kb on + strand at 246.498 kb on + strand at 246.498 kb on + strand at 246.499 kb on - strand at 246.499 kb on - strand at 246.545 kb on + strand at 246.545 kb on + strand at 246.687 kb on + strand, within H281DRAFT_00227 at 247.059 kb on - strand, within H281DRAFT_00227
Per-strain Table
Position Strand Gene LocusTag Fraction 3-Hydroxypropionate (C) remove 244,763 + +0.3 244,763 + +0.2 244,764 - -0.3 244,764 - +0.3 244,796 + -0.2 244,887 - H281DRAFT_00225 0.12 +0.4 244,997 - H281DRAFT_00225 0.27 +0.1 244,997 - H281DRAFT_00225 0.27 -1.3 244,997 - H281DRAFT_00225 0.27 +1.1 245,000 + H281DRAFT_00225 0.28 +0.4 245,000 + H281DRAFT_00225 0.28 +1.7 245,000 + H281DRAFT_00225 0.28 -0.4 245,000 + H281DRAFT_00225 0.28 -0.1 245,000 + H281DRAFT_00225 0.28 +0.4 245,000 + H281DRAFT_00225 0.28 -0.8 245,001 - H281DRAFT_00225 0.28 +0.4 245,001 - H281DRAFT_00225 0.28 -0.8 245,443 + +0.1 245,444 - -0.2 245,444 - +0.3 245,541 + -1.7 245,612 + +0.1 245,612 + -0.0 245,729 + -0.6 245,730 - +0.7 245,876 + H281DRAFT_00226 0.28 +0.9 245,876 + H281DRAFT_00226 0.28 +0.0 245,877 - H281DRAFT_00226 0.28 +0.8 245,877 - +1.8 245,877 - +0.9 246,192 - H281DRAFT_00226 0.86 +1.1 246,342 - +0.5 246,366 + +0.0 246,366 + -0.4 246,367 - +0.2 246,367 - +2.6 246,398 - -0.0 246,398 - -0.2 246,416 - +0.4 246,498 + +0.8 246,498 + +0.8 246,498 + +1.0 246,499 - +0.5 246,499 - +0.9 246,545 + +0.4 246,545 + +0.7 246,687 + H281DRAFT_00227 0.28 -0.3 247,059 - H281DRAFT_00227 0.79 +0.3
Or see this region's nucleotide sequence