Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_p187g40 and HP15_p187g41 are separated by 259 nucleotides HP15_p187g41 and HP15_p187g42 are separated by 26 nucleotides HP15_p187g42 and HP15_p187g43 are separated by 137 nucleotides
HP15_p187g40: HP15_p187g40 - GGDEF family protein, at 33,808 to 34,683
_p187g40
HP15_p187g41: HP15_p187g41 - hypothetical protein, at 34,943 to 35,161
_p187g41
HP15_p187g42: HP15_p187g42 - glucosamine--fructose-6-phosphate aminotransferase, isomerizing-like protein, at 35,188 to 35,697
_p187g42
HP15_p187g43: HP15_p187g43 - conserved hypothetical protein, at 35,835 to 37,220
_p187g43
Position (kb) 34
35
36 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 33.956 kb on + strand, within HP15_p187g40 at 33.964 kb on - strand, within HP15_p187g40 at 33.964 kb on - strand, within HP15_p187g40 at 33.964 kb on - strand, within HP15_p187g40 at 33.966 kb on + strand, within HP15_p187g40 at 33.966 kb on + strand, within HP15_p187g40 at 33.969 kb on - strand, within HP15_p187g40 at 33.974 kb on - strand, within HP15_p187g40 at 33.998 kb on + strand, within HP15_p187g40 at 34.005 kb on + strand, within HP15_p187g40 at 34.013 kb on + strand, within HP15_p187g40 at 34.020 kb on + strand, within HP15_p187g40 at 34.030 kb on + strand, within HP15_p187g40 at 34.067 kb on + strand, within HP15_p187g40 at 34.067 kb on + strand, within HP15_p187g40 at 34.075 kb on + strand, within HP15_p187g40 at 34.075 kb on - strand, within HP15_p187g40 at 34.083 kb on + strand, within HP15_p187g40 at 34.083 kb on - strand, within HP15_p187g40 at 34.086 kb on - strand, within HP15_p187g40 at 34.097 kb on + strand, within HP15_p187g40 at 34.097 kb on + strand, within HP15_p187g40 at 34.097 kb on + strand, within HP15_p187g40 at 34.112 kb on + strand, within HP15_p187g40 at 34.127 kb on + strand, within HP15_p187g40 at 34.131 kb on - strand, within HP15_p187g40 at 34.135 kb on - strand, within HP15_p187g40 at 34.141 kb on + strand, within HP15_p187g40 at 34.147 kb on - strand, within HP15_p187g40 at 34.149 kb on - strand, within HP15_p187g40 at 34.149 kb on - strand, within HP15_p187g40 at 34.174 kb on + strand, within HP15_p187g40 at 34.188 kb on + strand, within HP15_p187g40 at 34.241 kb on + strand, within HP15_p187g40 at 34.272 kb on + strand, within HP15_p187g40 at 34.273 kb on + strand, within HP15_p187g40 at 34.321 kb on + strand, within HP15_p187g40 at 34.321 kb on + strand, within HP15_p187g40 at 34.329 kb on - strand, within HP15_p187g40 at 34.382 kb on - strand, within HP15_p187g40 at 34.421 kb on + strand, within HP15_p187g40 at 34.441 kb on + strand, within HP15_p187g40 at 34.449 kb on - strand, within HP15_p187g40 at 34.449 kb on - strand, within HP15_p187g40 at 34.451 kb on + strand, within HP15_p187g40 at 34.485 kb on - strand, within HP15_p187g40 at 34.512 kb on + strand, within HP15_p187g40 at 34.519 kb on + strand, within HP15_p187g40 at 34.522 kb on + strand, within HP15_p187g40 at 34.525 kb on - strand, within HP15_p187g40 at 34.581 kb on - strand, within HP15_p187g40 at 34.581 kb on - strand, within HP15_p187g40 at 34.585 kb on + strand, within HP15_p187g40 at 34.609 kb on + strand at 34.609 kb on + strand at 34.609 kb on + strand at 34.609 kb on + strand at 34.612 kb on - strand at 34.617 kb on - strand at 34.617 kb on - strand at 34.625 kb on + strand at 34.625 kb on + strand at 34.681 kb on - strand at 34.767 kb on + strand at 34.771 kb on + strand at 34.772 kb on + strand at 34.780 kb on - strand at 34.780 kb on - strand at 34.874 kb on + strand at 34.876 kb on + strand at 34.935 kb on + strand at 34.935 kb on + strand at 34.935 kb on + strand at 34.943 kb on - strand at 34.943 kb on - strand at 34.943 kb on - strand at 34.943 kb on - strand at 34.962 kb on - strand at 34.995 kb on - strand, within HP15_p187g41 at 35.000 kb on + strand, within HP15_p187g41 at 35.008 kb on - strand, within HP15_p187g41 at 35.008 kb on - strand, within HP15_p187g41 at 35.008 kb on - strand, within HP15_p187g41 at 35.032 kb on + strand, within HP15_p187g41 at 35.032 kb on + strand, within HP15_p187g41 at 35.042 kb on - strand, within HP15_p187g41 at 35.064 kb on + strand, within HP15_p187g41 at 35.067 kb on + strand, within HP15_p187g41 at 35.067 kb on + strand, within HP15_p187g41 at 35.070 kb on - strand, within HP15_p187g41 at 35.077 kb on - strand, within HP15_p187g41 at 35.216 kb on + strand at 35.273 kb on + strand, within HP15_p187g42 at 35.273 kb on - strand, within HP15_p187g42 at 35.281 kb on - strand, within HP15_p187g42 at 35.281 kb on - strand, within HP15_p187g42 at 35.281 kb on - strand, within HP15_p187g42 at 35.308 kb on + strand, within HP15_p187g42 at 35.342 kb on - strand, within HP15_p187g42 at 35.344 kb on + strand, within HP15_p187g42 at 35.344 kb on + strand, within HP15_p187g42 at 35.362 kb on - strand, within HP15_p187g42 at 35.362 kb on - strand, within HP15_p187g42 at 35.399 kb on + strand, within HP15_p187g42 at 35.422 kb on - strand, within HP15_p187g42 at 35.450 kb on - strand, within HP15_p187g42 at 35.455 kb on - strand, within HP15_p187g42 at 35.488 kb on + strand, within HP15_p187g42 at 35.496 kb on - strand, within HP15_p187g42 at 35.498 kb on + strand, within HP15_p187g42 at 35.500 kb on + strand, within HP15_p187g42 at 35.506 kb on - strand, within HP15_p187g42 at 35.549 kb on + strand, within HP15_p187g42 at 35.562 kb on + strand, within HP15_p187g42 at 35.574 kb on + strand, within HP15_p187g42 at 35.606 kb on + strand, within HP15_p187g42 at 35.644 kb on + strand, within HP15_p187g42 at 35.651 kb on + strand at 35.658 kb on - strand at 35.659 kb on - strand at 35.690 kb on + strand at 35.699 kb on + strand at 35.711 kb on + strand at 35.742 kb on + strand at 35.750 kb on - strand at 35.760 kb on - strand at 35.790 kb on + strand at 35.795 kb on + strand at 35.858 kb on + strand at 35.859 kb on - strand at 35.860 kb on - strand at 35.866 kb on - strand at 35.866 kb on - strand at 35.871 kb on - strand at 35.872 kb on - strand at 35.885 kb on + strand at 35.893 kb on - strand at 35.900 kb on - strand at 35.900 kb on - strand at 35.931 kb on - strand at 35.954 kb on + strand at 36.057 kb on - strand, within HP15_p187g43 at 36.063 kb on + strand, within HP15_p187g43 at 36.117 kb on + strand, within HP15_p187g43 at 36.133 kb on + strand, within HP15_p187g43 at 36.147 kb on + strand, within HP15_p187g43
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 33,956 + HP15_p187g40 0.17 -2.4 33,964 - HP15_p187g40 0.18 -0.2 33,964 - HP15_p187g40 0.18 +0.5 33,964 - HP15_p187g40 0.18 +0.3 33,966 + HP15_p187g40 0.18 -0.8 33,966 + HP15_p187g40 0.18 -0.1 33,969 - HP15_p187g40 0.18 -0.4 33,974 - HP15_p187g40 0.19 -1.2 33,998 + HP15_p187g40 0.22 +1.2 34,005 + HP15_p187g40 0.22 -2.9 34,013 + HP15_p187g40 0.23 +1.1 34,020 + HP15_p187g40 0.24 +0.3 34,030 + HP15_p187g40 0.25 -0.7 34,067 + HP15_p187g40 0.30 -1.5 34,067 + HP15_p187g40 0.30 +0.7 34,075 + HP15_p187g40 0.30 +1.0 34,075 - HP15_p187g40 0.30 +0.3 34,083 + HP15_p187g40 0.31 -1.4 34,083 - HP15_p187g40 0.31 -0.8 34,086 - HP15_p187g40 0.32 -1.5 34,097 + HP15_p187g40 0.33 -1.8 34,097 + HP15_p187g40 0.33 -0.3 34,097 + HP15_p187g40 0.33 +0.6 34,112 + HP15_p187g40 0.35 -0.8 34,127 + HP15_p187g40 0.36 -0.3 34,131 - HP15_p187g40 0.37 -0.8 34,135 - HP15_p187g40 0.37 -0.1 34,141 + HP15_p187g40 0.38 +1.2 34,147 - HP15_p187g40 0.39 +0.6 34,149 - HP15_p187g40 0.39 -0.0 34,149 - HP15_p187g40 0.39 +0.4 34,174 + HP15_p187g40 0.42 +0.8 34,188 + HP15_p187g40 0.43 +2.6 34,241 + HP15_p187g40 0.49 -0.3 34,272 + HP15_p187g40 0.53 -0.4 34,273 + HP15_p187g40 0.53 +0.2 34,321 + HP15_p187g40 0.59 +0.7 34,321 + HP15_p187g40 0.59 +0.1 34,329 - HP15_p187g40 0.59 -0.0 34,382 - HP15_p187g40 0.66 +0.4 34,421 + HP15_p187g40 0.70 -0.2 34,441 + HP15_p187g40 0.72 +0.2 34,449 - HP15_p187g40 0.73 +1.0 34,449 - HP15_p187g40 0.73 +0.7 34,451 + HP15_p187g40 0.73 -0.5 34,485 - HP15_p187g40 0.77 -0.4 34,512 + HP15_p187g40 0.80 +1.7 34,519 + HP15_p187g40 0.81 -0.7 34,522 + HP15_p187g40 0.82 -0.8 34,525 - HP15_p187g40 0.82 +1.0 34,581 - HP15_p187g40 0.88 -0.5 34,581 - HP15_p187g40 0.88 +0.2 34,585 + HP15_p187g40 0.89 -1.2 34,609 + -0.8 34,609 + +0.1 34,609 + -0.8 34,609 + +0.7 34,612 - +0.0 34,617 - -0.1 34,617 - -1.0 34,625 + -0.4 34,625 + -1.3 34,681 - +0.8 34,767 + +0.8 34,771 + +0.4 34,772 + -0.7 34,780 - +0.4 34,780 - +0.4 34,874 + -0.4 34,876 + +0.2 34,935 + -1.3 34,935 + -0.5 34,935 + -0.0 34,943 - +0.4 34,943 - +1.6 34,943 - +0.5 34,943 - +0.2 34,962 - +0.2 34,995 - HP15_p187g41 0.24 +1.2 35,000 + HP15_p187g41 0.26 +0.9 35,008 - HP15_p187g41 0.30 -0.0 35,008 - HP15_p187g41 0.30 -1.4 35,008 - HP15_p187g41 0.30 +0.2 35,032 + HP15_p187g41 0.41 -0.8 35,032 + HP15_p187g41 0.41 +0.4 35,042 - HP15_p187g41 0.45 -0.1 35,064 + HP15_p187g41 0.55 +0.6 35,067 + HP15_p187g41 0.57 +0.8 35,067 + HP15_p187g41 0.57 -0.1 35,070 - HP15_p187g41 0.58 +0.6 35,077 - HP15_p187g41 0.61 +0.2 35,216 + +0.6 35,273 + HP15_p187g42 0.17 +0.2 35,273 - HP15_p187g42 0.17 -2.4 35,281 - HP15_p187g42 0.18 +0.2 35,281 - HP15_p187g42 0.18 +0.2 35,281 - HP15_p187g42 0.18 +1.6 35,308 + HP15_p187g42 0.24 -0.7 35,342 - HP15_p187g42 0.30 +0.2 35,344 + HP15_p187g42 0.31 -0.3 35,344 + HP15_p187g42 0.31 -1.2 35,362 - HP15_p187g42 0.34 +0.7 35,362 - HP15_p187g42 0.34 +0.2 35,399 + HP15_p187g42 0.41 +1.2 35,422 - HP15_p187g42 0.46 -0.5 35,450 - HP15_p187g42 0.51 +0.7 35,455 - HP15_p187g42 0.52 -0.7 35,488 + HP15_p187g42 0.59 -0.8 35,496 - HP15_p187g42 0.60 -0.2 35,498 + HP15_p187g42 0.61 -0.2 35,500 + HP15_p187g42 0.61 -0.0 35,506 - HP15_p187g42 0.62 +0.2 35,549 + HP15_p187g42 0.71 -1.1 35,562 + HP15_p187g42 0.73 -0.2 35,574 + HP15_p187g42 0.76 +0.2 35,606 + HP15_p187g42 0.82 +0.9 35,644 + HP15_p187g42 0.89 -1.4 35,651 + -2.4 35,658 - -1.1 35,659 - +0.6 35,690 + +0.2 35,699 + -0.3 35,711 + +1.2 35,742 + +0.1 35,750 - -1.8 35,760 - -1.6 35,790 + -0.2 35,795 + -0.0 35,858 + +0.2 35,859 - +0.6 35,860 - -0.2 35,866 - -2.9 35,866 - +0.2 35,871 - +0.7 35,872 - -0.2 35,885 + +0.4 35,893 - +2.6 35,900 - +0.8 35,900 - +0.6 35,931 - -0.5 35,954 + +0.6 36,057 - HP15_p187g43 0.16 +0.4 36,063 + HP15_p187g43 0.16 +0.1 36,117 + HP15_p187g43 0.20 -0.4 36,133 + HP15_p187g43 0.22 +0.2 36,147 + HP15_p187g43 0.23 -0.2
Or see this region's nucleotide sequence