Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_4107 and HP15_4108 overlap by 4 nucleotides HP15_4108 and HP15_4109 are separated by 6 nucleotides HP15_4109 and HP15_4110 overlap by 1 nucleotides
HP15_4107: HP15_4107 - endonuclease 8, at 4,339,785 to 4,340,600
_4107
HP15_4108: HP15_4108 - translation factor, SUA5 type, at 4,340,597 to 4,341,586
_4108
HP15_4109: HP15_4109 - conserved hypothetical protein, at 4,341,593 to 4,342,414
_4109
HP15_4110: HP15_4110 - conserved hypothetical protein, at 4,342,414 to 4,344,696
_4110
Position (kb)
4341
4342
4343 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4340.613 kb on + strand at 4340.613 kb on + strand at 4340.613 kb on + strand at 4340.613 kb on + strand at 4340.613 kb on + strand at 4340.621 kb on - strand at 4340.621 kb on - strand at 4340.621 kb on - strand at 4340.661 kb on - strand at 4340.721 kb on + strand, within HP15_4108 at 4340.729 kb on - strand, within HP15_4108 at 4340.887 kb on - strand, within HP15_4108 at 4340.918 kb on + strand, within HP15_4108 at 4340.926 kb on - strand, within HP15_4108 at 4340.926 kb on - strand, within HP15_4108 at 4341.006 kb on - strand, within HP15_4108 at 4341.032 kb on - strand, within HP15_4108 at 4341.066 kb on - strand, within HP15_4108 at 4341.077 kb on + strand, within HP15_4108 at 4341.077 kb on + strand, within HP15_4108 at 4341.129 kb on - strand, within HP15_4108 at 4341.376 kb on - strand, within HP15_4108 at 4341.556 kb on + strand at 4341.589 kb on + strand at 4341.606 kb on - strand at 4341.671 kb on - strand at 4341.731 kb on - strand, within HP15_4109 at 4341.884 kb on - strand, within HP15_4109 at 4341.900 kb on + strand, within HP15_4109 at 4341.912 kb on + strand, within HP15_4109 at 4341.912 kb on + strand, within HP15_4109 at 4341.912 kb on + strand, within HP15_4109 at 4341.912 kb on + strand, within HP15_4109 at 4341.912 kb on + strand, within HP15_4109 at 4341.912 kb on + strand, within HP15_4109 at 4341.920 kb on - strand, within HP15_4109 at 4341.920 kb on - strand, within HP15_4109 at 4341.920 kb on - strand, within HP15_4109 at 4341.920 kb on - strand, within HP15_4109 at 4341.920 kb on - strand, within HP15_4109 at 4341.952 kb on - strand, within HP15_4109 at 4341.998 kb on + strand, within HP15_4109 at 4342.011 kb on - strand, within HP15_4109 at 4342.019 kb on - strand, within HP15_4109 at 4342.047 kb on - strand, within HP15_4109 at 4342.070 kb on + strand, within HP15_4109 at 4342.099 kb on + strand, within HP15_4109 at 4342.099 kb on + strand, within HP15_4109 at 4342.107 kb on - strand, within HP15_4109 at 4342.146 kb on + strand, within HP15_4109 at 4342.151 kb on + strand, within HP15_4109 at 4342.151 kb on + strand, within HP15_4109 at 4342.151 kb on + strand, within HP15_4109 at 4342.324 kb on - strand, within HP15_4109 at 4342.324 kb on - strand, within HP15_4109 at 4342.344 kb on - strand at 4342.348 kb on + strand at 4342.503 kb on + strand at 4342.637 kb on + strand at 4342.637 kb on + strand at 4342.735 kb on + strand, within HP15_4110 at 4342.735 kb on + strand, within HP15_4110 at 4342.743 kb on - strand, within HP15_4110 at 4342.743 kb on - strand, within HP15_4110 at 4342.818 kb on + strand, within HP15_4110 at 4342.826 kb on - strand, within HP15_4110 at 4342.847 kb on - strand, within HP15_4110 at 4342.855 kb on + strand, within HP15_4110 at 4342.863 kb on - strand, within HP15_4110 at 4342.989 kb on + strand, within HP15_4110 at 4343.039 kb on - strand, within HP15_4110 at 4343.104 kb on - strand, within HP15_4110 at 4343.144 kb on - strand, within HP15_4110 at 4343.147 kb on + strand, within HP15_4110 at 4343.147 kb on + strand, within HP15_4110 at 4343.152 kb on + strand, within HP15_4110 at 4343.155 kb on - strand, within HP15_4110 at 4343.199 kb on + strand, within HP15_4110 at 4343.293 kb on + strand, within HP15_4110
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 4,340,613 + +0.5 4,340,613 + +1.1 4,340,613 + +0.3 4,340,613 + -1.7 4,340,613 + -1.6 4,340,621 - -0.0 4,340,621 - +1.1 4,340,621 - -0.5 4,340,661 - +0.3 4,340,721 + HP15_4108 0.13 +0.8 4,340,729 - HP15_4108 0.13 +0.2 4,340,887 - HP15_4108 0.29 +0.5 4,340,918 + HP15_4108 0.32 -0.3 4,340,926 - HP15_4108 0.33 -0.9 4,340,926 - HP15_4108 0.33 -0.2 4,341,006 - HP15_4108 0.41 -0.8 4,341,032 - HP15_4108 0.44 +0.1 4,341,066 - HP15_4108 0.47 -0.5 4,341,077 + HP15_4108 0.48 +0.1 4,341,077 + HP15_4108 0.48 +0.1 4,341,129 - HP15_4108 0.54 -0.4 4,341,376 - HP15_4108 0.79 +0.4 4,341,556 + -0.5 4,341,589 + -2.5 4,341,606 - +1.1 4,341,671 - -0.5 4,341,731 - HP15_4109 0.17 +0.1 4,341,884 - HP15_4109 0.35 +0.5 4,341,900 + HP15_4109 0.37 +2.2 4,341,912 + HP15_4109 0.39 -0.9 4,341,912 + HP15_4109 0.39 -1.2 4,341,912 + HP15_4109 0.39 +0.4 4,341,912 + HP15_4109 0.39 -0.6 4,341,912 + HP15_4109 0.39 +0.8 4,341,912 + HP15_4109 0.39 +0.1 4,341,920 - HP15_4109 0.40 -1.3 4,341,920 - HP15_4109 0.40 +0.2 4,341,920 - HP15_4109 0.40 +0.2 4,341,920 - HP15_4109 0.40 +0.1 4,341,920 - HP15_4109 0.40 +0.9 4,341,952 - HP15_4109 0.44 -2.1 4,341,998 + HP15_4109 0.49 -0.2 4,342,011 - HP15_4109 0.51 -0.6 4,342,019 - HP15_4109 0.52 -0.5 4,342,047 - HP15_4109 0.55 +0.1 4,342,070 + HP15_4109 0.58 +0.6 4,342,099 + HP15_4109 0.62 +0.1 4,342,099 + HP15_4109 0.62 +0.0 4,342,107 - HP15_4109 0.63 +1.1 4,342,146 + HP15_4109 0.67 +0.2 4,342,151 + HP15_4109 0.68 -1.8 4,342,151 + HP15_4109 0.68 -1.2 4,342,151 + HP15_4109 0.68 +0.3 4,342,324 - HP15_4109 0.89 +0.4 4,342,324 - HP15_4109 0.89 -0.2 4,342,344 - -0.6 4,342,348 + +0.7 4,342,503 + -0.5 4,342,637 + +1.1 4,342,637 + +0.7 4,342,735 + HP15_4110 0.14 +0.3 4,342,735 + HP15_4110 0.14 -1.2 4,342,743 - HP15_4110 0.14 -0.6 4,342,743 - HP15_4110 0.14 -0.3 4,342,818 + HP15_4110 0.18 +0.6 4,342,826 - HP15_4110 0.18 -0.7 4,342,847 - HP15_4110 0.19 +0.1 4,342,855 + HP15_4110 0.19 +0.1 4,342,863 - HP15_4110 0.20 +0.8 4,342,989 + HP15_4110 0.25 +0.7 4,343,039 - HP15_4110 0.27 -0.0 4,343,104 - HP15_4110 0.30 -0.6 4,343,144 - HP15_4110 0.32 +0.1 4,343,147 + HP15_4110 0.32 -1.0 4,343,147 + HP15_4110 0.32 +0.1 4,343,152 + HP15_4110 0.32 -0.7 4,343,155 - HP15_4110 0.32 +0.8 4,343,199 + HP15_4110 0.34 -0.1 4,343,293 + HP15_4110 0.39 +0.1
Or see this region's nucleotide sequence