Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3566 and HP15_3567 overlap by 15 nucleotides HP15_3567 and HP15_3568 are separated by 291 nucleotides HP15_3568 and HP15_3569 are separated by 191 nucleotides
HP15_3566: HP15_3566 - MATE efflux family protein, at 3,756,557 to 3,757,894
_3566
HP15_3567: HP15_3567 - conserved hypothetical protein, at 3,757,880 to 3,758,305
_3567
HP15_3568: HP15_3568 - beta-lactamase domain protein, at 3,758,597 to 3,760,234
_3568
HP15_3569: HP15_3569 - succinylglutamate desuccinylase/aspartoacylase, at 3,760,426 to 3,761,817
_3569
Position (kb)
3758
3759
3760
3761 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3757.608 kb on + strand, within HP15_3566 at 3757.649 kb on - strand, within HP15_3566 at 3757.701 kb on + strand, within HP15_3566 at 3757.711 kb on - strand, within HP15_3566 at 3757.765 kb on + strand at 3757.792 kb on - strand at 3757.792 kb on - strand at 3758.047 kb on + strand, within HP15_3567 at 3758.231 kb on - strand, within HP15_3567 at 3758.231 kb on - strand, within HP15_3567 at 3758.300 kb on + strand at 3758.404 kb on + strand at 3758.412 kb on - strand at 3758.427 kb on - strand at 3758.476 kb on - strand at 3758.476 kb on - strand at 3758.594 kb on + strand at 3758.649 kb on + strand at 3758.697 kb on - strand at 3758.799 kb on - strand, within HP15_3568 at 3758.819 kb on + strand, within HP15_3568 at 3758.827 kb on - strand, within HP15_3568 at 3758.827 kb on - strand, within HP15_3568 at 3758.827 kb on - strand, within HP15_3568 at 3758.847 kb on + strand, within HP15_3568 at 3758.855 kb on - strand, within HP15_3568 at 3758.887 kb on + strand, within HP15_3568 at 3758.924 kb on + strand, within HP15_3568 at 3759.007 kb on + strand, within HP15_3568 at 3759.024 kb on + strand, within HP15_3568 at 3759.091 kb on - strand, within HP15_3568 at 3759.138 kb on - strand, within HP15_3568 at 3759.146 kb on + strand, within HP15_3568 at 3759.173 kb on + strand, within HP15_3568 at 3759.181 kb on - strand, within HP15_3568 at 3759.215 kb on - strand, within HP15_3568 at 3759.242 kb on - strand, within HP15_3568 at 3759.395 kb on - strand, within HP15_3568 at 3759.397 kb on + strand, within HP15_3568 at 3759.405 kb on - strand, within HP15_3568 at 3759.501 kb on - strand, within HP15_3568 at 3759.558 kb on - strand, within HP15_3568 at 3759.575 kb on - strand, within HP15_3568 at 3759.625 kb on - strand, within HP15_3568 at 3759.625 kb on - strand, within HP15_3568 at 3759.759 kb on - strand, within HP15_3568 at 3759.765 kb on - strand, within HP15_3568 at 3759.778 kb on - strand, within HP15_3568 at 3759.779 kb on + strand, within HP15_3568 at 3759.801 kb on + strand, within HP15_3568 at 3759.867 kb on - strand, within HP15_3568 at 3759.868 kb on + strand, within HP15_3568 at 3759.870 kb on + strand, within HP15_3568 at 3759.870 kb on + strand, within HP15_3568 at 3759.870 kb on + strand, within HP15_3568 at 3759.870 kb on + strand, within HP15_3568 at 3759.876 kb on - strand, within HP15_3568 at 3759.876 kb on - strand, within HP15_3568 at 3759.878 kb on - strand, within HP15_3568 at 3759.910 kb on + strand, within HP15_3568 at 3759.910 kb on + strand, within HP15_3568 at 3759.954 kb on - strand, within HP15_3568 at 3760.012 kb on + strand, within HP15_3568 at 3760.038 kb on + strand, within HP15_3568 at 3760.206 kb on + strand at 3760.305 kb on - strand at 3760.352 kb on - strand at 3760.386 kb on + strand at 3760.394 kb on - strand at 3760.440 kb on + strand at 3760.566 kb on + strand, within HP15_3569 at 3760.685 kb on + strand, within HP15_3569 at 3760.747 kb on + strand, within HP15_3569 at 3760.790 kb on + strand, within HP15_3569 at 3760.872 kb on - strand, within HP15_3569 at 3760.873 kb on - strand, within HP15_3569 at 3760.909 kb on + strand, within HP15_3569 at 3760.922 kb on - strand, within HP15_3569 at 3760.947 kb on + strand, within HP15_3569 at 3760.947 kb on + strand, within HP15_3569 at 3760.955 kb on - strand, within HP15_3569 at 3760.991 kb on + strand, within HP15_3569 at 3760.999 kb on - strand, within HP15_3569 at 3761.005 kb on - strand, within HP15_3569 at 3761.041 kb on + strand, within HP15_3569 at 3761.093 kb on - strand, within HP15_3569
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 3,757,608 + HP15_3566 0.79 -0.4 3,757,649 - HP15_3566 0.82 +1.9 3,757,701 + HP15_3566 0.86 -0.2 3,757,711 - HP15_3566 0.86 -1.2 3,757,765 + +0.0 3,757,792 - +0.1 3,757,792 - +0.6 3,758,047 + HP15_3567 0.39 +0.4 3,758,231 - HP15_3567 0.82 +1.3 3,758,231 - HP15_3567 0.82 -1.1 3,758,300 + +2.4 3,758,404 + +0.2 3,758,412 - -1.6 3,758,427 - -1.9 3,758,476 - -1.0 3,758,476 - +0.6 3,758,594 + +0.2 3,758,649 + +1.7 3,758,697 - -0.7 3,758,799 - HP15_3568 0.12 -2.0 3,758,819 + HP15_3568 0.14 +0.8 3,758,827 - HP15_3568 0.14 +0.5 3,758,827 - HP15_3568 0.14 -0.8 3,758,827 - HP15_3568 0.14 -1.1 3,758,847 + HP15_3568 0.15 -0.1 3,758,855 - HP15_3568 0.16 -0.3 3,758,887 + HP15_3568 0.18 +0.4 3,758,924 + HP15_3568 0.20 +0.0 3,759,007 + HP15_3568 0.25 -0.9 3,759,024 + HP15_3568 0.26 -0.5 3,759,091 - HP15_3568 0.30 -1.1 3,759,138 - HP15_3568 0.33 +1.3 3,759,146 + HP15_3568 0.34 +0.1 3,759,173 + HP15_3568 0.35 +0.0 3,759,181 - HP15_3568 0.36 -0.3 3,759,215 - HP15_3568 0.38 +0.5 3,759,242 - HP15_3568 0.39 +0.3 3,759,395 - HP15_3568 0.49 -2.3 3,759,397 + HP15_3568 0.49 +0.1 3,759,405 - HP15_3568 0.49 -0.2 3,759,501 - HP15_3568 0.55 -1.5 3,759,558 - HP15_3568 0.59 +0.4 3,759,575 - HP15_3568 0.60 -0.6 3,759,625 - HP15_3568 0.63 -0.3 3,759,625 - HP15_3568 0.63 -0.3 3,759,759 - HP15_3568 0.71 +0.0 3,759,765 - HP15_3568 0.71 -0.0 3,759,778 - HP15_3568 0.72 -0.6 3,759,779 + HP15_3568 0.72 -0.1 3,759,801 + HP15_3568 0.74 -0.2 3,759,867 - HP15_3568 0.78 -0.8 3,759,868 + HP15_3568 0.78 -1.8 3,759,870 + HP15_3568 0.78 -0.9 3,759,870 + HP15_3568 0.78 +0.5 3,759,870 + HP15_3568 0.78 -0.8 3,759,870 + HP15_3568 0.78 -1.5 3,759,876 - HP15_3568 0.78 -0.3 3,759,876 - HP15_3568 0.78 +0.3 3,759,878 - HP15_3568 0.78 +1.1 3,759,910 + HP15_3568 0.80 +2.2 3,759,910 + HP15_3568 0.80 +0.5 3,759,954 - HP15_3568 0.83 -3.2 3,760,012 + HP15_3568 0.86 +1.5 3,760,038 + HP15_3568 0.88 +0.3 3,760,206 + -0.5 3,760,305 - -0.7 3,760,352 - -0.4 3,760,386 + -0.6 3,760,394 - -0.3 3,760,440 + +0.1 3,760,566 + HP15_3569 0.10 -0.1 3,760,685 + HP15_3569 0.19 -0.4 3,760,747 + HP15_3569 0.23 -1.1 3,760,790 + HP15_3569 0.26 -0.8 3,760,872 - HP15_3569 0.32 -0.0 3,760,873 - HP15_3569 0.32 -0.2 3,760,909 + HP15_3569 0.35 -1.1 3,760,922 - HP15_3569 0.36 -0.9 3,760,947 + HP15_3569 0.37 +1.1 3,760,947 + HP15_3569 0.37 -0.4 3,760,955 - HP15_3569 0.38 -3.1 3,760,991 + HP15_3569 0.41 -1.0 3,760,999 - HP15_3569 0.41 +0.4 3,761,005 - HP15_3569 0.42 -0.2 3,761,041 + HP15_3569 0.44 -1.2 3,761,093 - HP15_3569 0.48 -0.1
Or see this region's nucleotide sequence