Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2843 and HP15_2844 are separated by 121 nucleotides HP15_2844 and HP15_2845 are separated by 30 nucleotides HP15_2845 and HP15_2846 are separated by 224 nucleotides HP15_2846 and HP15_2847 are separated by 36 nucleotides
HP15_2843: HP15_2843 - YHS domain protein, at 2,985,656 to 2,986,099
_2843
HP15_2844: HP15_2844 - hypothetical protein, at 2,986,221 to 2,986,388
_2844
HP15_2845: HP15_2845 - conserved hypothetical protein, at 2,986,419 to 2,987,099
_2845
HP15_2846: HP15_2846 - conserved hypothetical protein, at 2,987,324 to 2,987,851
_2846
HP15_2847: HP15_2847 - secreted protein containing PEGA domain, at 2,987,888 to 2,988,502
_2847
Position (kb)
2986
2987
2988 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2985.425 kb on + strand at 2985.534 kb on - strand at 2985.539 kb on - strand at 2985.593 kb on + strand at 2985.609 kb on + strand at 2985.714 kb on - strand, within HP15_2843 at 2985.750 kb on + strand, within HP15_2843 at 2985.753 kb on - strand, within HP15_2843 at 2985.825 kb on + strand, within HP15_2843 at 2985.833 kb on - strand, within HP15_2843 at 2985.843 kb on - strand, within HP15_2843 at 2985.847 kb on - strand, within HP15_2843 at 2985.968 kb on + strand, within HP15_2843 at 2985.976 kb on - strand, within HP15_2843 at 2985.976 kb on - strand, within HP15_2843 at 2985.981 kb on - strand, within HP15_2843 at 2985.981 kb on - strand, within HP15_2843 at 2985.981 kb on - strand, within HP15_2843 at 2986.030 kb on - strand, within HP15_2843 at 2986.072 kb on + strand at 2986.096 kb on - strand at 2986.214 kb on - strand at 2986.214 kb on - strand at 2986.279 kb on - strand, within HP15_2844 at 2986.321 kb on + strand, within HP15_2844 at 2986.562 kb on + strand, within HP15_2845 at 2986.697 kb on + strand, within HP15_2845 at 2986.783 kb on + strand, within HP15_2845 at 2986.924 kb on - strand, within HP15_2845 at 2986.976 kb on + strand, within HP15_2845 at 2987.044 kb on + strand at 2987.166 kb on + strand at 2987.191 kb on + strand at 2987.199 kb on - strand at 2987.241 kb on - strand at 2987.300 kb on - strand at 2987.314 kb on + strand at 2987.334 kb on - strand at 2987.336 kb on + strand at 2987.338 kb on + strand at 2987.344 kb on - strand at 2987.346 kb on - strand at 2987.412 kb on + strand, within HP15_2846 at 2987.417 kb on + strand, within HP15_2846 at 2987.584 kb on + strand, within HP15_2846 at 2987.647 kb on - strand, within HP15_2846 at 2987.678 kb on - strand, within HP15_2846 at 2987.782 kb on + strand, within HP15_2846 at 2987.796 kb on - strand, within HP15_2846 at 2987.913 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 2,985,425 + -1.5 2,985,534 - +0.8 2,985,539 - -0.8 2,985,593 + +3.5 2,985,609 + -2.6 2,985,714 - HP15_2843 0.13 +0.9 2,985,750 + HP15_2843 0.21 -0.3 2,985,753 - HP15_2843 0.22 -1.1 2,985,825 + HP15_2843 0.38 +1.3 2,985,833 - HP15_2843 0.40 -1.6 2,985,843 - HP15_2843 0.42 -0.3 2,985,847 - HP15_2843 0.43 -0.3 2,985,968 + HP15_2843 0.70 +0.2 2,985,976 - HP15_2843 0.72 +0.3 2,985,976 - HP15_2843 0.72 +0.3 2,985,981 - HP15_2843 0.73 +0.6 2,985,981 - HP15_2843 0.73 -0.0 2,985,981 - HP15_2843 0.73 -1.0 2,986,030 - HP15_2843 0.84 +0.4 2,986,072 + +0.1 2,986,096 - -1.5 2,986,214 - +1.4 2,986,214 - -0.6 2,986,279 - HP15_2844 0.35 -1.0 2,986,321 + HP15_2844 0.60 -0.1 2,986,562 + HP15_2845 0.21 -1.5 2,986,697 + HP15_2845 0.41 +1.0 2,986,783 + HP15_2845 0.53 -0.6 2,986,924 - HP15_2845 0.74 -0.4 2,986,976 + HP15_2845 0.82 +0.6 2,987,044 + +1.3 2,987,166 + +0.0 2,987,191 + -0.7 2,987,199 - -0.4 2,987,241 - +0.7 2,987,300 - +0.5 2,987,314 + +0.0 2,987,334 - -0.9 2,987,336 + +2.3 2,987,338 + +0.0 2,987,344 - +0.5 2,987,346 - +2.2 2,987,412 + HP15_2846 0.17 -1.7 2,987,417 + HP15_2846 0.18 -0.3 2,987,584 + HP15_2846 0.49 +0.3 2,987,647 - HP15_2846 0.61 -0.5 2,987,678 - HP15_2846 0.67 -1.5 2,987,782 + HP15_2846 0.87 +0.3 2,987,796 - HP15_2846 0.89 +0.0 2,987,913 - -0.3
Or see this region's nucleotide sequence