Strain Fitness in Marinobacter adhaerens HP15 around HP15_2664

Experiment: m.b. Benzethonium chloride 0.025 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2662 and HP15_2663 overlap by 4 nucleotidesHP15_2663 and HP15_2664 are separated by 18 nucleotidesHP15_2664 and HP15_2665 are separated by 69 nucleotidesHP15_2665 and HP15_2666 are separated by 10 nucleotidesHP15_2666 and HP15_2667 are separated by 97 nucleotides HP15_2662: HP15_2662 - two-component sensor histidine kinase, at 2,811,938 to 2,813,557 _2662 HP15_2663: HP15_2663 - response regulator receiver and unknown domain protein, at 2,813,554 to 2,814,249 _2663 HP15_2664: HP15_2664 - peptidase M48, Ste24p, at 2,814,268 to 2,815,059 _2664 HP15_2665: HP15_2665 - conserved hypothetical protein, membrane, at 2,815,129 to 2,815,641 _2665 HP15_2666: HP15_2666 - membrane protein, at 2,815,652 to 2,815,930 _2666 HP15_2667: HP15_2667 - ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein, at 2,816,028 to 2,816,810 _2667 Position (kb) 2814 2815 2816Strain fitness (log2 ratio) -1 0 1 2 3at 2813.294 kb on - strand, within HP15_2662at 2813.400 kb on + strandat 2813.401 kb on - strandat 2813.424 kb on + strandat 2813.432 kb on - strandat 2813.458 kb on + strandat 2813.458 kb on + strandat 2813.458 kb on + strandat 2813.466 kb on - strandat 2813.480 kb on + strandat 2813.521 kb on - strandat 2813.521 kb on - strandat 2813.521 kb on - strandat 2813.521 kb on - strandat 2813.521 kb on - strandat 2813.521 kb on - strandat 2813.772 kb on - strand, within HP15_2663at 2813.818 kb on + strand, within HP15_2663at 2813.818 kb on + strand, within HP15_2663at 2813.832 kb on - strand, within HP15_2663at 2813.912 kb on + strand, within HP15_2663at 2813.912 kb on + strand, within HP15_2663at 2813.920 kb on - strand, within HP15_2663at 2813.979 kb on + strand, within HP15_2663at 2814.264 kb on - strandat 2814.367 kb on + strand, within HP15_2664at 2814.382 kb on + strand, within HP15_2664at 2814.392 kb on + strand, within HP15_2664at 2814.446 kb on + strand, within HP15_2664at 2814.446 kb on + strand, within HP15_2664at 2814.446 kb on + strand, within HP15_2664at 2814.446 kb on + strand, within HP15_2664at 2814.454 kb on - strand, within HP15_2664at 2814.456 kb on + strand, within HP15_2664at 2814.464 kb on - strand, within HP15_2664at 2814.468 kb on + strand, within HP15_2664at 2814.469 kb on + strand, within HP15_2664at 2814.477 kb on - strand, within HP15_2664at 2814.484 kb on + strand, within HP15_2664at 2814.553 kb on + strand, within HP15_2664at 2814.568 kb on - strand, within HP15_2664at 2814.703 kb on - strand, within HP15_2664at 2814.770 kb on - strand, within HP15_2664at 2814.777 kb on + strand, within HP15_2664at 2814.878 kb on + strand, within HP15_2664at 2814.896 kb on + strand, within HP15_2664at 2814.904 kb on - strand, within HP15_2664at 2815.056 kb on - strandat 2815.082 kb on - strandat 2815.165 kb on - strandat 2815.165 kb on - strandat 2815.212 kb on + strand, within HP15_2665at 2815.264 kb on - strand, within HP15_2665at 2815.418 kb on + strand, within HP15_2665at 2815.452 kb on + strand, within HP15_2665at 2815.452 kb on + strand, within HP15_2665at 2815.452 kb on + strand, within HP15_2665at 2815.460 kb on - strand, within HP15_2665at 2815.460 kb on - strand, within HP15_2665at 2815.460 kb on - strand, within HP15_2665at 2815.460 kb on - strand, within HP15_2665at 2815.486 kb on - strand, within HP15_2665at 2815.588 kb on + strand, within HP15_2665at 2815.745 kb on + strand, within HP15_2666at 2815.943 kb on + strandat 2816.024 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM
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2,813,294 - HP15_2662 0.84 +1.3
2,813,400 + +1.1
2,813,401 - +2.4
2,813,424 + +1.2
2,813,432 - +1.5
2,813,458 + +0.4
2,813,458 + +0.9
2,813,458 + +1.3
2,813,466 - +0.5
2,813,480 + +1.0
2,813,521 - +1.0
2,813,521 - +2.8
2,813,521 - +0.1
2,813,521 - +1.2
2,813,521 - -0.8
2,813,521 - +1.6
2,813,772 - HP15_2663 0.31 +0.5
2,813,818 + HP15_2663 0.38 +1.7
2,813,818 + HP15_2663 0.38 +1.9
2,813,832 - HP15_2663 0.40 +2.9
2,813,912 + HP15_2663 0.51 -0.6
2,813,912 + HP15_2663 0.51 +0.9
2,813,920 - HP15_2663 0.53 +0.9
2,813,979 + HP15_2663 0.61 -0.1
2,814,264 - +1.1
2,814,367 + HP15_2664 0.12 +1.7
2,814,382 + HP15_2664 0.14 +0.1
2,814,392 + HP15_2664 0.16 +0.2
2,814,446 + HP15_2664 0.22 +0.8
2,814,446 + HP15_2664 0.22 +0.1
2,814,446 + HP15_2664 0.22 -0.4
2,814,446 + HP15_2664 0.22 +0.5
2,814,454 - HP15_2664 0.23 -0.1
2,814,456 + HP15_2664 0.24 +0.7
2,814,464 - HP15_2664 0.25 +0.9
2,814,468 + HP15_2664 0.25 -0.2
2,814,469 + HP15_2664 0.25 +0.4
2,814,477 - HP15_2664 0.26 -1.6
2,814,484 + HP15_2664 0.27 +0.3
2,814,553 + HP15_2664 0.36 +0.2
2,814,568 - HP15_2664 0.38 +0.2
2,814,703 - HP15_2664 0.55 -0.2
2,814,770 - HP15_2664 0.63 -1.5
2,814,777 + HP15_2664 0.64 +0.1
2,814,878 + HP15_2664 0.77 -0.4
2,814,896 + HP15_2664 0.79 -1.3
2,814,904 - HP15_2664 0.80 +0.2
2,815,056 - -0.7
2,815,082 - +0.0
2,815,165 - +0.7
2,815,165 - +0.1
2,815,212 + HP15_2665 0.16 +0.6
2,815,264 - HP15_2665 0.26 +0.2
2,815,418 + HP15_2665 0.56 -0.5
2,815,452 + HP15_2665 0.63 -0.1
2,815,452 + HP15_2665 0.63 +0.1
2,815,452 + HP15_2665 0.63 +0.1
2,815,460 - HP15_2665 0.65 +0.1
2,815,460 - HP15_2665 0.65 -1.5
2,815,460 - HP15_2665 0.65 +1.5
2,815,460 - HP15_2665 0.65 -1.2
2,815,486 - HP15_2665 0.70 +0.7
2,815,588 + HP15_2665 0.89 +1.2
2,815,745 + HP15_2666 0.33 +0.8
2,815,943 + -1.1
2,816,024 + +0.4

Or see this region's nucleotide sequence