Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1762 and HP15_1763 are separated by 60 nucleotides HP15_1763 and HP15_1764 are separated by 14 nucleotides HP15_1764 and HP15_1765 are separated by 380 nucleotides
HP15_1762: HP15_1762 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase, at 1,860,350 to 1,861,417
_1762
HP15_1763: HP15_1763 - anti-anti-sigma regulatory factor (antagonist of anti-sigma factor), at 1,861,478 to 1,861,969
_1763
HP15_1764: HP15_1764 - two-component response regulator, at 1,861,984 to 1,862,925
_1764
HP15_1765: HP15_1765 - HD superfamily phosphohydrolase, at 1,863,306 to 1,864,790
_1765
Position (kb)
1861
1862
1863 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1861.450 kb on - strand at 1861.465 kb on - strand at 1861.549 kb on - strand, within HP15_1763 at 1861.841 kb on - strand, within HP15_1763 at 1862.257 kb on - strand, within HP15_1764 at 1862.312 kb on - strand, within HP15_1764 at 1862.422 kb on - strand, within HP15_1764 at 1862.551 kb on - strand, within HP15_1764 at 1862.573 kb on + strand, within HP15_1764 at 1862.578 kb on + strand, within HP15_1764 at 1862.680 kb on - strand, within HP15_1764 at 1862.730 kb on + strand, within HP15_1764 at 1862.778 kb on + strand, within HP15_1764 at 1862.928 kb on - strand at 1863.175 kb on - strand at 1863.207 kb on - strand at 1863.256 kb on + strand at 1863.374 kb on - strand at 1863.427 kb on - strand at 1863.502 kb on + strand, within HP15_1765 at 1863.502 kb on + strand, within HP15_1765 at 1863.502 kb on + strand, within HP15_1765 at 1863.502 kb on + strand, within HP15_1765 at 1863.502 kb on + strand, within HP15_1765 at 1863.502 kb on + strand, within HP15_1765 at 1863.510 kb on - strand, within HP15_1765 at 1863.510 kb on - strand, within HP15_1765 at 1863.510 kb on - strand, within HP15_1765 at 1863.528 kb on + strand, within HP15_1765 at 1863.564 kb on - strand, within HP15_1765 at 1863.589 kb on + strand, within HP15_1765 at 1863.595 kb on + strand, within HP15_1765 at 1863.597 kb on - strand, within HP15_1765 at 1863.597 kb on - strand, within HP15_1765 at 1863.778 kb on + strand, within HP15_1765 at 1863.778 kb on + strand, within HP15_1765 at 1863.870 kb on - strand, within HP15_1765
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 1,861,450 - +0.2 1,861,465 - -1.2 1,861,549 - HP15_1763 0.14 +1.6 1,861,841 - HP15_1763 0.74 +2.8 1,862,257 - HP15_1764 0.29 +1.3 1,862,312 - HP15_1764 0.35 +2.1 1,862,422 - HP15_1764 0.46 +0.4 1,862,551 - HP15_1764 0.60 -0.2 1,862,573 + HP15_1764 0.63 +1.6 1,862,578 + HP15_1764 0.63 +1.7 1,862,680 - HP15_1764 0.74 +2.1 1,862,730 + HP15_1764 0.79 +0.3 1,862,778 + HP15_1764 0.84 +2.5 1,862,928 - +3.2 1,863,175 - +1.8 1,863,207 - +0.8 1,863,256 + +2.1 1,863,374 - -2.5 1,863,427 - -0.8 1,863,502 + HP15_1765 0.13 +0.6 1,863,502 + HP15_1765 0.13 +2.1 1,863,502 + HP15_1765 0.13 +0.9 1,863,502 + HP15_1765 0.13 +2.9 1,863,502 + HP15_1765 0.13 +1.0 1,863,502 + HP15_1765 0.13 +0.6 1,863,510 - HP15_1765 0.14 -0.8 1,863,510 - HP15_1765 0.14 +0.9 1,863,510 - HP15_1765 0.14 +0.8 1,863,528 + HP15_1765 0.15 -0.2 1,863,564 - HP15_1765 0.17 -0.1 1,863,589 + HP15_1765 0.19 +1.6 1,863,595 + HP15_1765 0.19 +1.9 1,863,597 - HP15_1765 0.20 +0.1 1,863,597 - HP15_1765 0.20 +0.6 1,863,778 + HP15_1765 0.32 +0.4 1,863,778 + HP15_1765 0.32 +0.3 1,863,870 - HP15_1765 0.38 -2.9
Or see this region's nucleotide sequence