Strain Fitness in Marinobacter adhaerens HP15 around HP15_1764

Experiment: m.b. Benzethonium chloride 0.025 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1762 and HP15_1763 are separated by 60 nucleotidesHP15_1763 and HP15_1764 are separated by 14 nucleotidesHP15_1764 and HP15_1765 are separated by 380 nucleotides HP15_1762: HP15_1762 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase, at 1,860,350 to 1,861,417 _1762 HP15_1763: HP15_1763 - anti-anti-sigma regulatory factor (antagonist of anti-sigma factor), at 1,861,478 to 1,861,969 _1763 HP15_1764: HP15_1764 - two-component response regulator, at 1,861,984 to 1,862,925 _1764 HP15_1765: HP15_1765 - HD superfamily phosphohydrolase, at 1,863,306 to 1,864,790 _1765 Position (kb) 1861 1862 1863Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1861.450 kb on - strandat 1861.465 kb on - strandat 1861.549 kb on - strand, within HP15_1763at 1861.841 kb on - strand, within HP15_1763at 1862.257 kb on - strand, within HP15_1764at 1862.312 kb on - strand, within HP15_1764at 1862.422 kb on - strand, within HP15_1764at 1862.551 kb on - strand, within HP15_1764at 1862.573 kb on + strand, within HP15_1764at 1862.578 kb on + strand, within HP15_1764at 1862.680 kb on - strand, within HP15_1764at 1862.730 kb on + strand, within HP15_1764at 1862.778 kb on + strand, within HP15_1764at 1862.928 kb on - strandat 1863.175 kb on - strandat 1863.207 kb on - strandat 1863.256 kb on + strandat 1863.374 kb on - strandat 1863.427 kb on - strandat 1863.502 kb on + strand, within HP15_1765at 1863.502 kb on + strand, within HP15_1765at 1863.502 kb on + strand, within HP15_1765at 1863.502 kb on + strand, within HP15_1765at 1863.502 kb on + strand, within HP15_1765at 1863.502 kb on + strand, within HP15_1765at 1863.510 kb on - strand, within HP15_1765at 1863.510 kb on - strand, within HP15_1765at 1863.510 kb on - strand, within HP15_1765at 1863.528 kb on + strand, within HP15_1765at 1863.564 kb on - strand, within HP15_1765at 1863.589 kb on + strand, within HP15_1765at 1863.595 kb on + strand, within HP15_1765at 1863.597 kb on - strand, within HP15_1765at 1863.597 kb on - strand, within HP15_1765at 1863.778 kb on + strand, within HP15_1765at 1863.778 kb on + strand, within HP15_1765at 1863.870 kb on - strand, within HP15_1765

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM
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1,861,450 - +0.2
1,861,465 - -1.2
1,861,549 - HP15_1763 0.14 +1.6
1,861,841 - HP15_1763 0.74 +2.8
1,862,257 - HP15_1764 0.29 +1.3
1,862,312 - HP15_1764 0.35 +2.1
1,862,422 - HP15_1764 0.46 +0.4
1,862,551 - HP15_1764 0.60 -0.2
1,862,573 + HP15_1764 0.63 +1.6
1,862,578 + HP15_1764 0.63 +1.7
1,862,680 - HP15_1764 0.74 +2.1
1,862,730 + HP15_1764 0.79 +0.3
1,862,778 + HP15_1764 0.84 +2.5
1,862,928 - +3.2
1,863,175 - +1.8
1,863,207 - +0.8
1,863,256 + +2.1
1,863,374 - -2.5
1,863,427 - -0.8
1,863,502 + HP15_1765 0.13 +0.6
1,863,502 + HP15_1765 0.13 +2.1
1,863,502 + HP15_1765 0.13 +0.9
1,863,502 + HP15_1765 0.13 +2.9
1,863,502 + HP15_1765 0.13 +1.0
1,863,502 + HP15_1765 0.13 +0.6
1,863,510 - HP15_1765 0.14 -0.8
1,863,510 - HP15_1765 0.14 +0.9
1,863,510 - HP15_1765 0.14 +0.8
1,863,528 + HP15_1765 0.15 -0.2
1,863,564 - HP15_1765 0.17 -0.1
1,863,589 + HP15_1765 0.19 +1.6
1,863,595 + HP15_1765 0.19 +1.9
1,863,597 - HP15_1765 0.20 +0.1
1,863,597 - HP15_1765 0.20 +0.6
1,863,778 + HP15_1765 0.32 +0.4
1,863,778 + HP15_1765 0.32 +0.3
1,863,870 - HP15_1765 0.38 -2.9

Or see this region's nucleotide sequence