Strain Fitness in Marinobacter adhaerens HP15 around HP15_1760

Experiment: m.b. Benzethonium chloride 0.025 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1758 and HP15_1759 are separated by 199 nucleotidesHP15_1759 and HP15_1760 are separated by 24 nucleotidesHP15_1760 and HP15_1761 are separated by 45 nucleotidesHP15_1761 and HP15_1762 are separated by 42 nucleotides HP15_1758: HP15_1758 - peptidylprolyl isomerase, FKBP-type, at 1,857,664 to 1,858,125 _1758 HP15_1759: HP15_1759 - protein containing DUF1285, at 1,858,325 to 1,858,891 _1759 HP15_1760: HP15_1760 - oxygen-independent coproporphyrinogen III oxidase, Fe-S oxidoreductase, at 1,858,916 to 1,859,812 _1760 HP15_1761: HP15_1761 - phosphohistidine phosphatase, SixA, at 1,859,858 to 1,860,307 _1761 HP15_1762: HP15_1762 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase, at 1,860,350 to 1,861,417 _1762 Position (kb) 1858 1859 1860Strain fitness (log2 ratio) -2 -1 0 1 2at 1857.925 kb on + strand, within HP15_1758at 1858.200 kb on + strandat 1858.208 kb on - strandat 1858.424 kb on + strand, within HP15_1759at 1858.479 kb on + strand, within HP15_1759at 1858.563 kb on - strand, within HP15_1759at 1858.600 kb on + strand, within HP15_1759at 1858.681 kb on - strand, within HP15_1759at 1858.757 kb on + strand, within HP15_1759at 1858.928 kb on + strandat 1858.936 kb on - strandat 1858.953 kb on + strandat 1859.064 kb on + strand, within HP15_1760at 1859.064 kb on + strand, within HP15_1760at 1859.072 kb on - strand, within HP15_1760at 1859.233 kb on + strand, within HP15_1760at 1859.272 kb on - strand, within HP15_1760at 1859.365 kb on + strand, within HP15_1760at 1859.780 kb on - strandat 1859.804 kb on + strandat 1859.807 kb on + strandat 1859.934 kb on + strand, within HP15_1761at 1859.944 kb on + strand, within HP15_1761at 1860.149 kb on + strand, within HP15_1761at 1860.151 kb on + strand, within HP15_1761at 1860.151 kb on + strand, within HP15_1761at 1860.159 kb on - strand, within HP15_1761at 1860.162 kb on + strand, within HP15_1761at 1860.170 kb on - strand, within HP15_1761at 1860.220 kb on + strand, within HP15_1761at 1860.301 kb on + strandat 1860.309 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM
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1,857,925 + HP15_1758 0.56 +0.1
1,858,200 + +1.0
1,858,208 - +1.1
1,858,424 + HP15_1759 0.17 -1.4
1,858,479 + HP15_1759 0.27 +2.4
1,858,563 - HP15_1759 0.42 -2.7
1,858,600 + HP15_1759 0.49 -1.2
1,858,681 - HP15_1759 0.63 +0.3
1,858,757 + HP15_1759 0.76 +0.8
1,858,928 + -0.3
1,858,936 - -0.9
1,858,953 + +0.5
1,859,064 + HP15_1760 0.16 -0.2
1,859,064 + HP15_1760 0.16 +0.3
1,859,072 - HP15_1760 0.17 +1.5
1,859,233 + HP15_1760 0.35 +0.8
1,859,272 - HP15_1760 0.40 +1.1
1,859,365 + HP15_1760 0.50 +0.5
1,859,780 - -1.7
1,859,804 + +1.3
1,859,807 + +0.8
1,859,934 + HP15_1761 0.17 -0.2
1,859,944 + HP15_1761 0.19 +0.4
1,860,149 + HP15_1761 0.65 -1.2
1,860,151 + HP15_1761 0.65 -1.7
1,860,151 + HP15_1761 0.65 +0.6
1,860,159 - HP15_1761 0.67 -0.5
1,860,162 + HP15_1761 0.68 -0.4
1,860,170 - HP15_1761 0.69 +1.1
1,860,220 + HP15_1761 0.80 +0.6
1,860,301 + +0.3
1,860,309 + +2.1

Or see this region's nucleotide sequence