Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1085 and HP15_1086 are separated by 85 nucleotides HP15_1086 and HP15_1087 are separated by 285 nucleotides HP15_1087 and HP15_1088 are separated by 277 nucleotides HP15_1088 and HP15_1089 are separated by 141 nucleotides
HP15_1085: HP15_1085 - conserved hypothetical protein, at 1,113,480 to 1,113,923
_1085
HP15_1086: HP15_1086 - hypothetical protein, at 1,114,009 to 1,114,248
_1086
HP15_1087: HP15_1087 - prophage CP4-57 regulatory, at 1,114,534 to 1,114,761
_1087
HP15_1088: HP15_1088 - conserved hypothetical protein, membrane, at 1,115,039 to 1,115,383
_1088
HP15_1089: HP15_1089 - conserved hypothetical protein, at 1,115,525 to 1,116,487
_1089
Position (kb)
1114
1115 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1113.636 kb on + strand, within HP15_1085 at 1113.672 kb on - strand, within HP15_1085 at 1113.714 kb on - strand, within HP15_1085 at 1113.746 kb on - strand, within HP15_1085 at 1113.762 kb on - strand, within HP15_1085 at 1113.769 kb on - strand, within HP15_1085 at 1113.810 kb on + strand, within HP15_1085 at 1113.824 kb on + strand, within HP15_1085 at 1113.824 kb on + strand, within HP15_1085 at 1113.824 kb on + strand, within HP15_1085 at 1113.824 kb on + strand, within HP15_1085 at 1113.832 kb on - strand, within HP15_1085 at 1113.850 kb on - strand, within HP15_1085 at 1113.908 kb on + strand at 1113.911 kb on - strand at 1113.933 kb on - strand at 1114.051 kb on - strand, within HP15_1086 at 1114.061 kb on - strand, within HP15_1086 at 1114.372 kb on - strand at 1114.501 kb on + strand at 1114.501 kb on - strand at 1114.541 kb on + strand at 1114.610 kb on - strand, within HP15_1087 at 1114.658 kb on - strand, within HP15_1087 at 1114.660 kb on + strand, within HP15_1087 at 1114.872 kb on - strand at 1115.216 kb on - strand, within HP15_1088 at 1115.249 kb on + strand, within HP15_1088 at 1115.259 kb on - strand, within HP15_1088 at 1115.288 kb on - strand, within HP15_1088 at 1115.433 kb on + strand at 1115.433 kb on + strand at 1115.566 kb on - strand at 1115.633 kb on + strand, within HP15_1089 at 1115.666 kb on - strand, within HP15_1089 at 1115.666 kb on - strand, within HP15_1089 at 1115.734 kb on - strand, within HP15_1089 at 1115.743 kb on + strand, within HP15_1089
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 1,113,636 + HP15_1085 0.35 -0.9 1,113,672 - HP15_1085 0.43 -0.8 1,113,714 - HP15_1085 0.53 +1.8 1,113,746 - HP15_1085 0.60 -1.4 1,113,762 - HP15_1085 0.64 -1.8 1,113,769 - HP15_1085 0.65 -0.8 1,113,810 + HP15_1085 0.74 -0.8 1,113,824 + HP15_1085 0.77 +0.6 1,113,824 + HP15_1085 0.77 -0.5 1,113,824 + HP15_1085 0.77 +1.2 1,113,824 + HP15_1085 0.77 +0.2 1,113,832 - HP15_1085 0.79 +0.3 1,113,850 - HP15_1085 0.83 +0.6 1,113,908 + -0.2 1,113,911 - +0.2 1,113,933 - -1.6 1,114,051 - HP15_1086 0.17 +0.8 1,114,061 - HP15_1086 0.22 -0.3 1,114,372 - +0.8 1,114,501 + +1.2 1,114,501 - -0.2 1,114,541 + -0.2 1,114,610 - HP15_1087 0.33 -1.8 1,114,658 - HP15_1087 0.54 -0.4 1,114,660 + HP15_1087 0.55 +0.2 1,114,872 - -0.0 1,115,216 - HP15_1088 0.51 -1.2 1,115,249 + HP15_1088 0.61 -0.6 1,115,259 - HP15_1088 0.64 +0.1 1,115,288 - HP15_1088 0.72 -1.1 1,115,433 + +0.4 1,115,433 + -1.3 1,115,566 - +0.4 1,115,633 + HP15_1089 0.11 -0.5 1,115,666 - HP15_1089 0.15 -0.5 1,115,666 - HP15_1089 0.15 -0.4 1,115,734 - HP15_1089 0.22 +0.1 1,115,743 + HP15_1089 0.23 +0.3
Or see this region's nucleotide sequence