Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1058 and HP15_1059 are separated by 252 nucleotides HP15_1059 and HP15_1060 are separated by 111 nucleotides HP15_1060 and HP15_1061 overlap by 4 nucleotides
HP15_1058: HP15_1058 - 2,4-dienoyl-CoA reductase, at 1,080,961 to 1,083,030
_1058
HP15_1059: HP15_1059 - ATPase involved in DNA repair, at 1,083,283 to 1,084,482
_1059
HP15_1060: HP15_1060 - inorganic polyphosphate/ATP-NAD kinase, at 1,084,594 to 1,085,478
_1060
HP15_1061: HP15_1061 - diadenosine tetraphosphatase and related serine/threonine protein phosphatase, at 1,085,475 to 1,086,494
_1061
Position (kb)
1083
1084
1085 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1082.310 kb on - strand, within HP15_1058 at 1082.336 kb on + strand, within HP15_1058 at 1082.417 kb on + strand, within HP15_1058 at 1082.463 kb on - strand, within HP15_1058 at 1082.477 kb on + strand, within HP15_1058 at 1082.521 kb on - strand, within HP15_1058 at 1082.606 kb on - strand, within HP15_1058 at 1082.630 kb on + strand, within HP15_1058 at 1082.638 kb on - strand, within HP15_1058 at 1082.687 kb on + strand, within HP15_1058 at 1082.781 kb on - strand, within HP15_1058 at 1082.808 kb on + strand, within HP15_1058 at 1082.831 kb on - strand at 1082.839 kb on - strand at 1082.839 kb on - strand at 1082.870 kb on + strand at 1083.066 kb on - strand at 1083.146 kb on + strand at 1083.154 kb on - strand at 1083.204 kb on - strand at 1083.356 kb on + strand at 1083.356 kb on + strand at 1083.383 kb on + strand at 1083.467 kb on - strand, within HP15_1059 at 1083.528 kb on - strand, within HP15_1059 at 1083.595 kb on + strand, within HP15_1059 at 1083.657 kb on - strand, within HP15_1059 at 1083.821 kb on - strand, within HP15_1059 at 1083.887 kb on - strand, within HP15_1059 at 1083.941 kb on + strand, within HP15_1059 at 1083.941 kb on + strand, within HP15_1059 at 1083.944 kb on - strand, within HP15_1059 at 1084.068 kb on + strand, within HP15_1059 at 1084.100 kb on + strand, within HP15_1059 at 1084.309 kb on - strand, within HP15_1059 at 1084.395 kb on + strand at 1084.403 kb on - strand at 1084.408 kb on - strand at 1084.484 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 1,082,310 - HP15_1058 0.65 -0.9 1,082,336 + HP15_1058 0.66 -1.0 1,082,417 + HP15_1058 0.70 +0.6 1,082,463 - HP15_1058 0.73 -0.1 1,082,477 + HP15_1058 0.73 +0.2 1,082,521 - HP15_1058 0.75 +0.4 1,082,606 - HP15_1058 0.79 +0.6 1,082,630 + HP15_1058 0.81 -0.4 1,082,638 - HP15_1058 0.81 +0.3 1,082,687 + HP15_1058 0.83 +0.6 1,082,781 - HP15_1058 0.88 -0.3 1,082,808 + HP15_1058 0.89 +1.0 1,082,831 - +0.9 1,082,839 - +0.7 1,082,839 - +1.4 1,082,870 + -1.5 1,083,066 - -2.1 1,083,146 + +1.4 1,083,154 - +0.5 1,083,204 - -1.4 1,083,356 + +0.4 1,083,356 + +1.9 1,083,383 + +0.7 1,083,467 - HP15_1059 0.15 +1.1 1,083,528 - HP15_1059 0.20 -1.2 1,083,595 + HP15_1059 0.26 +0.5 1,083,657 - HP15_1059 0.31 +1.4 1,083,821 - HP15_1059 0.45 +0.3 1,083,887 - HP15_1059 0.50 +0.1 1,083,941 + HP15_1059 0.55 -2.1 1,083,941 + HP15_1059 0.55 +0.1 1,083,944 - HP15_1059 0.55 -1.2 1,084,068 + HP15_1059 0.65 +0.2 1,084,100 + HP15_1059 0.68 -0.9 1,084,309 - HP15_1059 0.85 -0.1 1,084,395 + -0.2 1,084,403 - +0.4 1,084,408 - -0.6 1,084,484 - +0.9
Or see this region's nucleotide sequence