Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2517 and Dsui_2518 are separated by 119 nucleotides Dsui_2518 and Dsui_2519 are separated by 45 nucleotides Dsui_2519 and Dsui_2520 are separated by 700 nucleotides
Dsui_2517: Dsui_2517 - transposase, at 2,667,970 to 2,668,926
_2517
Dsui_2518: Dsui_2518 - hypothetical protein, at 2,669,046 to 2,669,519
_2518
Dsui_2519: Dsui_2519 - methyl-accepting chemotaxis protein, at 2,669,565 to 2,671,214
_2519
Dsui_2520: Dsui_2520 - flagellar basal-body rod protein FlgF, at 2,671,915 to 2,672,661
_2520
Position (kb)
2669
2670
2671
2672 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2669.130 kb on + strand, within Dsui_2518 at 2669.156 kb on + strand, within Dsui_2518 at 2669.220 kb on - strand, within Dsui_2518 at 2669.234 kb on - strand, within Dsui_2518 at 2669.258 kb on + strand at 2669.386 kb on - strand, within Dsui_2518 at 2669.403 kb on + strand, within Dsui_2518 at 2669.692 kb on - strand at 2669.806 kb on + strand at 2669.893 kb on + strand, within Dsui_2519 at 2669.901 kb on - strand, within Dsui_2519 at 2670.126 kb on - strand, within Dsui_2519 at 2670.222 kb on - strand, within Dsui_2519 at 2670.254 kb on - strand, within Dsui_2519 at 2670.306 kb on + strand, within Dsui_2519 at 2670.400 kb on - strand, within Dsui_2519 at 2670.442 kb on - strand, within Dsui_2519 at 2670.451 kb on - strand, within Dsui_2519 at 2670.490 kb on + strand at 2670.508 kb on - strand, within Dsui_2519 at 2670.711 kb on - strand, within Dsui_2519 at 2670.726 kb on - strand, within Dsui_2519 at 2670.726 kb on - strand, within Dsui_2519 at 2670.732 kb on - strand, within Dsui_2519 at 2670.805 kb on - strand, within Dsui_2519 at 2671.242 kb on - strand at 2671.242 kb on - strand at 2671.267 kb on + strand at 2671.353 kb on + strand at 2671.353 kb on + strand at 2671.361 kb on - strand at 2671.387 kb on - strand at 2671.387 kb on - strand at 2671.387 kb on - strand at 2671.475 kb on + strand at 2671.480 kb on + strand at 2671.518 kb on - strand at 2671.523 kb on - strand at 2671.551 kb on - strand at 2671.551 kb on - strand at 2671.558 kb on - strand at 2671.621 kb on - strand at 2671.621 kb on - strand at 2671.926 kb on + strand at 2671.986 kb on + strand at 2671.989 kb on - strand at 2672.054 kb on + strand, within Dsui_2520 at 2672.094 kb on - strand, within Dsui_2520 at 2672.127 kb on + strand, within Dsui_2520 at 2672.131 kb on - strand, within Dsui_2520 at 2672.131 kb on - strand, within Dsui_2520 at 2672.131 kb on - strand, within Dsui_2520 at 2672.131 kb on - strand, within Dsui_2520 at 2672.131 kb on - strand, within Dsui_2520 at 2672.131 kb on - strand, within Dsui_2520 at 2672.133 kb on - strand at 2672.133 kb on - strand at 2672.152 kb on - strand, within Dsui_2520 at 2672.172 kb on - strand, within Dsui_2520 at 2672.172 kb on - strand, within Dsui_2520
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 2,669,130 + Dsui_2518 0.18 -0.4 2,669,156 + Dsui_2518 0.23 -1.7 2,669,220 - Dsui_2518 0.37 -0.4 2,669,234 - Dsui_2518 0.40 +0.2 2,669,258 + +0.6 2,669,386 - Dsui_2518 0.72 -2.6 2,669,403 + Dsui_2518 0.75 -2.2 2,669,692 - -2.9 2,669,806 + +0.6 2,669,893 + Dsui_2519 0.20 -0.4 2,669,901 - Dsui_2519 0.20 +0.0 2,670,126 - Dsui_2519 0.34 -0.4 2,670,222 - Dsui_2519 0.40 -1.2 2,670,254 - Dsui_2519 0.42 -1.0 2,670,306 + Dsui_2519 0.45 +0.6 2,670,400 - Dsui_2519 0.51 +0.6 2,670,442 - Dsui_2519 0.53 +0.6 2,670,451 - Dsui_2519 0.54 +0.6 2,670,490 + +0.6 2,670,508 - Dsui_2519 0.57 -0.7 2,670,711 - Dsui_2519 0.69 +1.2 2,670,726 - Dsui_2519 0.70 -0.4 2,670,726 - Dsui_2519 0.70 -1.7 2,670,732 - Dsui_2519 0.71 +1.2 2,670,805 - Dsui_2519 0.75 -1.0 2,671,242 - -1.7 2,671,242 - +0.6 2,671,267 + +0.6 2,671,353 + -0.4 2,671,353 + +0.6 2,671,361 - +0.6 2,671,387 - -1.7 2,671,387 - -0.4 2,671,387 - +0.6 2,671,475 + +0.6 2,671,480 + +0.6 2,671,518 - -0.4 2,671,523 - -1.0 2,671,551 - -0.4 2,671,551 - +0.6 2,671,558 - -3.1 2,671,621 - +0.6 2,671,621 - +0.6 2,671,926 + -1.4 2,671,986 + -0.4 2,671,989 - +0.6 2,672,054 + Dsui_2520 0.19 +0.6 2,672,094 - Dsui_2520 0.24 -1.0 2,672,127 + Dsui_2520 0.28 -0.4 2,672,131 - Dsui_2520 0.29 -1.0 2,672,131 - Dsui_2520 0.29 -2.0 2,672,131 - Dsui_2520 0.29 +0.6 2,672,131 - Dsui_2520 0.29 -1.4 2,672,131 - Dsui_2520 0.29 -0.4 2,672,131 - Dsui_2520 0.29 -2.2 2,672,133 - +0.6 2,672,133 - +0.6 2,672,152 - Dsui_2520 0.32 +0.6 2,672,172 - Dsui_2520 0.34 -2.4 2,672,172 - Dsui_2520 0.34 -0.4
Or see this region's nucleotide sequence