Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2346 and Dsui_2347 are separated by 396 nucleotides Dsui_2347 and Dsui_2348 are separated by 202 nucleotides Dsui_2348 and Dsui_2349 are separated by 294 nucleotides
Dsui_2346: Dsui_2346 - putative signal transduction protein containing EAL and modified HD-GYP domains, at 2,497,017 to 2,498,384
_2346
Dsui_2347: Dsui_2347 - aconitate hydratase 1, at 2,498,781 to 2,501,477
_2347
Dsui_2348: Dsui_2348 - hypothetical protein, at 2,501,680 to 2,502,048
_2348
Dsui_2349: Dsui_2349 - Zn-dependent hydrolase, glyoxylase, at 2,502,343 to 2,503,311
_2349
Position (kb)
2498
2499
2500
2501
2502 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2497.834 kb on - strand, within Dsui_2346 at 2497.895 kb on + strand at 2497.903 kb on - strand, within Dsui_2346 at 2498.327 kb on - strand at 2498.346 kb on - strand at 2498.346 kb on - strand at 2498.361 kb on + strand at 2498.417 kb on - strand at 2498.417 kb on - strand at 2498.417 kb on - strand at 2498.417 kb on - strand at 2498.417 kb on - strand at 2498.430 kb on + strand at 2498.442 kb on + strand at 2498.467 kb on - strand at 2498.499 kb on + strand at 2498.507 kb on - strand at 2498.507 kb on - strand at 2498.507 kb on - strand at 2498.507 kb on - strand at 2498.512 kb on - strand at 2498.512 kb on - strand at 2498.538 kb on + strand at 2498.595 kb on - strand at 2498.595 kb on - strand at 2498.620 kb on - strand at 2498.620 kb on - strand at 2498.680 kb on - strand at 2498.680 kb on - strand at 2498.680 kb on - strand at 2498.680 kb on - strand at 2498.811 kb on - strand at 2498.840 kb on - strand at 2498.840 kb on - strand at 2498.886 kb on - strand at 2498.886 kb on - strand at 2498.930 kb on - strand at 2498.941 kb on - strand at 2498.941 kb on - strand at 2498.950 kb on - strand at 2499.030 kb on - strand at 2499.134 kb on + strand at 2499.175 kb on - strand, within Dsui_2347 at 2499.201 kb on - strand, within Dsui_2347 at 2499.244 kb on - strand, within Dsui_2347 at 2499.244 kb on - strand, within Dsui_2347 at 2499.328 kb on + strand at 2499.329 kb on - strand, within Dsui_2347 at 2499.419 kb on + strand at 2499.451 kb on + strand at 2499.526 kb on - strand, within Dsui_2347 at 2499.558 kb on + strand at 2499.581 kb on - strand, within Dsui_2347 at 2499.581 kb on - strand, within Dsui_2347 at 2499.622 kb on - strand, within Dsui_2347 at 2499.637 kb on + strand at 2499.663 kb on + strand at 2499.695 kb on + strand at 2499.703 kb on - strand at 2499.723 kb on + strand, within Dsui_2347 at 2499.730 kb on - strand, within Dsui_2347 at 2499.783 kb on - strand, within Dsui_2347 at 2499.913 kb on + strand, within Dsui_2347 at 2500.049 kb on + strand at 2500.072 kb on + strand, within Dsui_2347 at 2500.083 kb on + strand at 2500.083 kb on + strand, within Dsui_2347 at 2500.091 kb on - strand, within Dsui_2347 at 2500.107 kb on - strand, within Dsui_2347 at 2500.151 kb on + strand at 2500.211 kb on - strand at 2500.290 kb on + strand at 2500.346 kb on - strand, within Dsui_2347 at 2500.357 kb on - strand, within Dsui_2347 at 2500.362 kb on - strand, within Dsui_2347 at 2500.399 kb on - strand, within Dsui_2347 at 2500.612 kb on - strand, within Dsui_2347 at 2500.644 kb on - strand, within Dsui_2347 at 2500.649 kb on + strand at 2500.708 kb on + strand at 2500.732 kb on + strand at 2500.735 kb on - strand, within Dsui_2347 at 2500.742 kb on + strand at 2500.750 kb on - strand, within Dsui_2347 at 2500.841 kb on - strand, within Dsui_2347 at 2500.851 kb on - strand, within Dsui_2347 at 2500.863 kb on - strand, within Dsui_2347 at 2500.916 kb on - strand, within Dsui_2347 at 2500.928 kb on + strand at 2500.961 kb on + strand at 2500.969 kb on - strand, within Dsui_2347 at 2500.969 kb on - strand, within Dsui_2347 at 2501.027 kb on - strand, within Dsui_2347 at 2501.054 kb on - strand, within Dsui_2347 at 2501.076 kb on + strand at 2501.089 kb on - strand, within Dsui_2347 at 2501.522 kb on - strand at 2501.655 kb on + strand at 2501.663 kb on - strand at 2501.663 kb on - strand at 2501.725 kb on - strand, within Dsui_2348 at 2501.731 kb on - strand, within Dsui_2348 at 2501.769 kb on - strand at 2501.770 kb on - strand, within Dsui_2348 at 2501.780 kb on - strand, within Dsui_2348 at 2501.809 kb on - strand, within Dsui_2348 at 2501.895 kb on + strand at 2502.038 kb on - strand at 2502.038 kb on - strand at 2502.140 kb on + strand at 2502.216 kb on - strand at 2502.317 kb on - strand at 2502.319 kb on - strand at 2502.334 kb on + strand at 2502.397 kb on - strand at 2502.436 kb on - strand at 2502.436 kb on - strand at 2502.461 kb on - strand, within Dsui_2349
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 2,497,834 - Dsui_2346 0.60 -0.2 2,497,895 + -0.9 2,497,903 - Dsui_2346 0.65 -0.9 2,498,327 - -1.7 2,498,346 - +2.3 2,498,346 - -0.9 2,498,361 + -0.3 2,498,417 - -1.3 2,498,417 - +0.7 2,498,417 - -0.6 2,498,417 - -1.7 2,498,417 - +0.2 2,498,430 + -1.9 2,498,442 + -0.9 2,498,467 - -1.3 2,498,499 + -0.3 2,498,507 - +0.7 2,498,507 - -1.3 2,498,507 - -0.9 2,498,507 - -2.1 2,498,512 - -0.9 2,498,512 - -0.9 2,498,538 + -0.9 2,498,595 - -0.3 2,498,595 - -0.9 2,498,620 - -0.3 2,498,620 - +0.7 2,498,680 - -2.8 2,498,680 - -0.9 2,498,680 - -0.3 2,498,680 - +0.7 2,498,811 - +0.7 2,498,840 - -1.0 2,498,840 - -1.3 2,498,886 - -0.9 2,498,886 - +0.7 2,498,930 - -1.6 2,498,941 - -0.3 2,498,941 - -0.9 2,498,950 - -0.3 2,499,030 - -1.7 2,499,134 + +0.7 2,499,175 - Dsui_2347 0.15 -0.9 2,499,201 - Dsui_2347 0.16 -2.5 2,499,244 - Dsui_2347 0.17 -1.3 2,499,244 - Dsui_2347 0.17 +0.7 2,499,328 + +0.7 2,499,329 - Dsui_2347 0.20 -1.7 2,499,419 + -0.9 2,499,451 + +0.7 2,499,526 - Dsui_2347 0.28 -0.3 2,499,558 + +0.7 2,499,581 - Dsui_2347 0.30 -0.5 2,499,581 - Dsui_2347 0.30 -1.7 2,499,622 - Dsui_2347 0.31 -1.0 2,499,637 + +0.7 2,499,663 + -1.3 2,499,695 + +0.7 2,499,703 - -0.9 2,499,723 + Dsui_2347 0.35 -1.3 2,499,730 - Dsui_2347 0.35 -0.9 2,499,783 - Dsui_2347 0.37 -0.9 2,499,913 + Dsui_2347 0.42 -0.9 2,500,049 + +0.7 2,500,072 + Dsui_2347 0.48 +0.1 2,500,083 + -0.3 2,500,083 + Dsui_2347 0.48 -2.3 2,500,091 - Dsui_2347 0.49 -2.2 2,500,107 - Dsui_2347 0.49 +1.4 2,500,151 + -0.3 2,500,211 - +0.7 2,500,290 + +0.7 2,500,346 - Dsui_2347 0.58 -1.3 2,500,357 - Dsui_2347 0.58 -0.3 2,500,362 - Dsui_2347 0.59 -0.3 2,500,399 - Dsui_2347 0.60 +0.7 2,500,612 - Dsui_2347 0.68 -0.3 2,500,644 - Dsui_2347 0.69 +0.7 2,500,649 + +0.7 2,500,708 + -0.3 2,500,732 + +0.7 2,500,735 - Dsui_2347 0.72 -1.7 2,500,742 + +1.7 2,500,750 - Dsui_2347 0.73 -0.3 2,500,841 - Dsui_2347 0.76 -0.3 2,500,851 - Dsui_2347 0.77 +0.7 2,500,863 - Dsui_2347 0.77 +0.7 2,500,916 - Dsui_2347 0.79 -0.3 2,500,928 + +0.7 2,500,961 + -1.7 2,500,969 - Dsui_2347 0.81 +0.7 2,500,969 - Dsui_2347 0.81 +0.7 2,501,027 - Dsui_2347 0.83 -0.3 2,501,054 - Dsui_2347 0.84 -0.3 2,501,076 + +0.7 2,501,089 - Dsui_2347 0.86 -1.3 2,501,522 - -0.3 2,501,655 + -0.3 2,501,663 - -0.5 2,501,663 - -1.9 2,501,725 - Dsui_2348 0.12 -2.9 2,501,731 - Dsui_2348 0.14 -2.0 2,501,769 - -0.9 2,501,770 - Dsui_2348 0.24 -0.9 2,501,780 - Dsui_2348 0.27 -0.3 2,501,809 - Dsui_2348 0.35 +0.7 2,501,895 + +0.7 2,502,038 - -0.1 2,502,038 - -0.3 2,502,140 + +0.7 2,502,216 - -0.3 2,502,317 - -1.9 2,502,319 - -0.9 2,502,334 + +0.7 2,502,397 - +0.7 2,502,436 - -1.7 2,502,436 - +0.7 2,502,461 - Dsui_2349 0.12 -1.3
Or see this region's nucleotide sequence