Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1636 and Dsui_1637 are separated by 120 nucleotides Dsui_1637 and Dsui_1638 overlap by 4 nucleotides Dsui_1638 and Dsui_1639 overlap by 1 nucleotides
Dsui_1636: Dsui_1636 - poly(3-hydroxyalkanoate) synthetase, at 1,718,521 to 1,720,278
_1636
Dsui_1637: Dsui_1637 - 2-nitropropane dioxygenase-like enzyme, at 1,720,399 to 1,721,562
_1637
Dsui_1638: Dsui_1638 - methyl-accepting chemotaxis protein, at 1,721,559 to 1,722,224
_1638
Dsui_1639: Dsui_1639 - putative flavoprotein, at 1,722,224 to 1,722,964
_1639
Position (kb)
1720
1721
1722 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1719.450 kb on + strand, within Dsui_1636 at 1719.458 kb on - strand, within Dsui_1636 at 1719.501 kb on + strand, within Dsui_1636 at 1719.551 kb on + strand, within Dsui_1636 at 1719.559 kb on - strand, within Dsui_1636 at 1719.744 kb on + strand, within Dsui_1636 at 1719.797 kb on + strand, within Dsui_1636 at 1719.824 kb on + strand, within Dsui_1636 at 1720.079 kb on + strand, within Dsui_1636 at 1720.079 kb on + strand, within Dsui_1636 at 1720.178 kb on + strand at 1720.259 kb on + strand at 1720.259 kb on + strand at 1720.654 kb on + strand, within Dsui_1637 at 1720.671 kb on + strand, within Dsui_1637 at 1720.969 kb on - strand, within Dsui_1637 at 1721.136 kb on - strand, within Dsui_1637 at 1721.566 kb on - strand at 1721.571 kb on - strand at 1721.588 kb on + strand at 1721.620 kb on + strand at 1721.681 kb on + strand, within Dsui_1638 at 1721.681 kb on + strand, within Dsui_1638 at 1721.689 kb on - strand, within Dsui_1638 at 1721.717 kb on + strand, within Dsui_1638 at 1721.773 kb on + strand, within Dsui_1638 at 1721.786 kb on + strand, within Dsui_1638 at 1721.824 kb on + strand, within Dsui_1638 at 1721.858 kb on - strand, within Dsui_1638 at 1721.907 kb on - strand, within Dsui_1638 at 1722.080 kb on - strand, within Dsui_1638 at 1722.178 kb on + strand at 1722.180 kb on + strand at 1722.362 kb on - strand, within Dsui_1639 at 1722.479 kb on + strand, within Dsui_1639 at 1722.511 kb on + strand, within Dsui_1639
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 1,719,450 + Dsui_1636 0.53 -1.5 1,719,458 - Dsui_1636 0.53 -1.8 1,719,501 + Dsui_1636 0.56 -0.5 1,719,551 + Dsui_1636 0.59 -0.9 1,719,559 - Dsui_1636 0.59 -1.5 1,719,744 + Dsui_1636 0.70 -2.7 1,719,797 + Dsui_1636 0.73 +0.3 1,719,824 + Dsui_1636 0.74 -0.5 1,720,079 + Dsui_1636 0.89 -1.8 1,720,079 + Dsui_1636 0.89 -0.5 1,720,178 + -1.1 1,720,259 + -0.1 1,720,259 + +0.5 1,720,654 + Dsui_1637 0.22 -2.3 1,720,671 + Dsui_1637 0.23 -0.2 1,720,969 - Dsui_1637 0.49 -1.8 1,721,136 - Dsui_1637 0.63 -3.0 1,721,566 - -1.8 1,721,571 - +0.5 1,721,588 + +0.1 1,721,620 + -0.1 1,721,681 + Dsui_1638 0.18 -0.0 1,721,681 + Dsui_1638 0.18 -0.1 1,721,689 - Dsui_1638 0.20 -0.5 1,721,717 + Dsui_1638 0.24 -0.2 1,721,773 + Dsui_1638 0.32 -0.1 1,721,786 + Dsui_1638 0.34 -0.2 1,721,824 + Dsui_1638 0.40 +0.1 1,721,858 - Dsui_1638 0.45 -2.8 1,721,907 - Dsui_1638 0.52 -4.0 1,722,080 - Dsui_1638 0.78 -1.1 1,722,178 + +0.2 1,722,180 + -0.0 1,722,362 - Dsui_1639 0.19 -1.1 1,722,479 + Dsui_1639 0.34 -0.0 1,722,511 + Dsui_1639 0.39 -0.1
Or see this region's nucleotide sequence