Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1295 and Dsui_1296 are separated by 21 nucleotides Dsui_1296 and Dsui_1297 are separated by 85 nucleotides
Dsui_1295: Dsui_1295 - lipid A core-O-antigen ligase-like enyme, at 1,357,876 to 1,359,690
_1295
Dsui_1296: Dsui_1296 - putative amidophosphoribosyltransferase, at 1,359,712 to 1,360,437
_1296
Dsui_1297: Dsui_1297 - biotin synthetase, at 1,360,523 to 1,361,530
_1297
Position (kb)
1359
1360
1361 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1358.724 kb on + strand, within Dsui_1295 at 1358.863 kb on - strand, within Dsui_1295 at 1358.865 kb on - strand, within Dsui_1295 at 1358.873 kb on + strand, within Dsui_1295 at 1358.939 kb on + strand, within Dsui_1295 at 1358.950 kb on + strand, within Dsui_1295 at 1358.957 kb on - strand, within Dsui_1295 at 1358.958 kb on - strand, within Dsui_1295 at 1359.013 kb on + strand, within Dsui_1295 at 1359.069 kb on + strand, within Dsui_1295 at 1359.075 kb on + strand, within Dsui_1295 at 1359.083 kb on - strand, within Dsui_1295 at 1359.084 kb on - strand, within Dsui_1295 at 1359.098 kb on - strand, within Dsui_1295 at 1359.136 kb on + strand, within Dsui_1295 at 1359.183 kb on + strand, within Dsui_1295 at 1359.183 kb on + strand, within Dsui_1295 at 1359.191 kb on - strand, within Dsui_1295 at 1359.199 kb on + strand, within Dsui_1295 at 1359.199 kb on + strand, within Dsui_1295 at 1359.242 kb on - strand, within Dsui_1295 at 1359.258 kb on + strand, within Dsui_1295 at 1359.269 kb on + strand, within Dsui_1295 at 1359.406 kb on - strand, within Dsui_1295 at 1359.454 kb on - strand, within Dsui_1295 at 1359.479 kb on - strand, within Dsui_1295 at 1359.488 kb on + strand at 1359.510 kb on - strand at 1359.531 kb on + strand at 1359.552 kb on + strand at 1359.566 kb on + strand at 1359.566 kb on + strand at 1359.574 kb on - strand at 1359.604 kb on - strand at 1359.622 kb on + strand at 1359.624 kb on - strand at 1359.648 kb on + strand at 1359.658 kb on + strand at 1359.666 kb on - strand at 1359.756 kb on - strand at 1359.842 kb on - strand, within Dsui_1296 at 1359.906 kb on + strand, within Dsui_1296 at 1359.914 kb on - strand, within Dsui_1296 at 1359.970 kb on - strand at 1359.984 kb on - strand, within Dsui_1296 at 1360.080 kb on - strand, within Dsui_1296 at 1360.124 kb on - strand, within Dsui_1296 at 1360.129 kb on - strand, within Dsui_1296 at 1360.226 kb on - strand, within Dsui_1296 at 1360.238 kb on - strand, within Dsui_1296 at 1360.402 kb on + strand at 1360.410 kb on + strand at 1360.410 kb on - strand at 1360.918 kb on + strand, within Dsui_1297 at 1361.279 kb on + strand, within Dsui_1297 at 1361.290 kb on + strand, within Dsui_1297 at 1361.355 kb on + strand, within Dsui_1297
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 1,358,724 + Dsui_1295 0.47 +0.5 1,358,863 - Dsui_1295 0.54 -1.1 1,358,865 - Dsui_1295 0.54 -0.3 1,358,873 + Dsui_1295 0.55 -0.5 1,358,939 + Dsui_1295 0.59 -1.1 1,358,950 + Dsui_1295 0.59 -2.1 1,358,957 - Dsui_1295 0.60 +0.5 1,358,958 - Dsui_1295 0.60 -1.1 1,359,013 + Dsui_1295 0.63 -1.1 1,359,069 + Dsui_1295 0.66 +0.5 1,359,075 + Dsui_1295 0.66 -0.5 1,359,083 - Dsui_1295 0.67 -0.5 1,359,084 - Dsui_1295 0.67 -0.5 1,359,098 - Dsui_1295 0.67 +0.5 1,359,136 + Dsui_1295 0.69 -0.5 1,359,183 + Dsui_1295 0.72 -0.5 1,359,183 + Dsui_1295 0.72 -0.5 1,359,191 - Dsui_1295 0.72 -0.5 1,359,199 + Dsui_1295 0.73 +0.5 1,359,199 + Dsui_1295 0.73 +0.5 1,359,242 - Dsui_1295 0.75 +0.5 1,359,258 + Dsui_1295 0.76 +0.5 1,359,269 + Dsui_1295 0.77 -0.5 1,359,406 - Dsui_1295 0.84 +2.1 1,359,454 - Dsui_1295 0.87 +0.5 1,359,479 - Dsui_1295 0.88 -1.5 1,359,488 + -0.5 1,359,510 - -0.5 1,359,531 + +0.5 1,359,552 + -0.5 1,359,566 + +0.5 1,359,566 + -0.5 1,359,574 - -0.5 1,359,604 - -2.7 1,359,622 + -0.5 1,359,624 - -1.8 1,359,648 + +0.5 1,359,658 + -0.5 1,359,666 - -2.1 1,359,756 - -0.5 1,359,842 - Dsui_1296 0.18 -1.1 1,359,906 + Dsui_1296 0.27 -1.5 1,359,914 - Dsui_1296 0.28 -0.5 1,359,970 - +0.5 1,359,984 - Dsui_1296 0.37 -1.5 1,360,080 - Dsui_1296 0.51 +0.5 1,360,124 - Dsui_1296 0.57 -2.3 1,360,129 - Dsui_1296 0.57 +0.5 1,360,226 - Dsui_1296 0.71 -2.7 1,360,238 - Dsui_1296 0.72 -1.1 1,360,402 + +0.5 1,360,410 + +0.5 1,360,410 - +0.5 1,360,918 + Dsui_1297 0.39 -3.7 1,361,279 + Dsui_1297 0.75 -1.7 1,361,290 + Dsui_1297 0.76 -2.4 1,361,355 + Dsui_1297 0.83 -2.6
Or see this region's nucleotide sequence