Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0219 and Dsui_0220 are separated by 205 nucleotides Dsui_0220 and Dsui_0221 are separated by 142 nucleotides Dsui_0221 and Dsui_0222 are separated by 126 nucleotides
Dsui_0219: Dsui_0219 - anthranilate synthase component I, at 217,374 to 218,849
_0219
Dsui_0220: Dsui_0220 - 2-phosphoglycolate phosphatase, at 219,055 to 219,717
_0220
Dsui_0221: Dsui_0221 - ribulose-phosphate 3-epimerase, at 219,860 to 220,549
_0221
Dsui_0222: Dsui_0222 - uncharacterized protein affecting Mg2+/Co2+ transport, at 220,676 to 221,059
_0222
Position (kb) 219
220 Strain fitness (log2 ratio) -2
-1
0
1 at 218.976 kb on - strand at 218.976 kb on - strand at 219.129 kb on - strand, within Dsui_0220 at 219.153 kb on - strand, within Dsui_0220 at 219.264 kb on - strand, within Dsui_0220 at 219.270 kb on - strand, within Dsui_0220 at 219.283 kb on - strand, within Dsui_0220 at 219.299 kb on - strand, within Dsui_0220 at 219.339 kb on - strand, within Dsui_0220 at 219.344 kb on - strand, within Dsui_0220 at 219.368 kb on - strand, within Dsui_0220 at 219.369 kb on - strand, within Dsui_0220 at 219.369 kb on - strand, within Dsui_0220 at 219.383 kb on - strand, within Dsui_0220 at 219.400 kb on - strand, within Dsui_0220 at 219.428 kb on - strand, within Dsui_0220 at 219.446 kb on - strand, within Dsui_0220 at 219.529 kb on - strand, within Dsui_0220 at 219.595 kb on + strand, within Dsui_0220 at 219.603 kb on - strand, within Dsui_0220 at 219.623 kb on + strand, within Dsui_0220 at 219.708 kb on + strand at 219.762 kb on - strand at 219.772 kb on + strand at 220.619 kb on + strand at 220.628 kb on + strand at 220.651 kb on - strand at 220.660 kb on + strand at 220.667 kb on + strand at 220.667 kb on + strand at 220.667 kb on + strand at 220.668 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 218,976 - +0.0 218,976 - -0.1 219,129 - Dsui_0220 0.11 +1.0 219,153 - Dsui_0220 0.15 -0.4 219,264 - Dsui_0220 0.32 -0.3 219,270 - Dsui_0220 0.32 -0.9 219,283 - Dsui_0220 0.34 -0.4 219,299 - Dsui_0220 0.37 -2.0 219,339 - Dsui_0220 0.43 -0.3 219,344 - Dsui_0220 0.44 -0.6 219,368 - Dsui_0220 0.47 -0.2 219,369 - Dsui_0220 0.47 -0.9 219,369 - Dsui_0220 0.47 -0.8 219,383 - Dsui_0220 0.49 -0.4 219,400 - Dsui_0220 0.52 -0.5 219,428 - Dsui_0220 0.56 -1.1 219,446 - Dsui_0220 0.59 -0.3 219,529 - Dsui_0220 0.71 -0.2 219,595 + Dsui_0220 0.81 -1.0 219,603 - Dsui_0220 0.83 -0.6 219,623 + Dsui_0220 0.86 -1.7 219,708 + +0.6 219,762 - -0.6 219,772 + -2.0 220,619 + -0.6 220,628 + -0.4 220,651 - -2.0 220,660 + -0.6 220,667 + -0.2 220,667 + -0.4 220,667 + -0.2 220,668 - -0.4
Or see this region's nucleotide sequence