Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03294

Experiment: PYE_noCalcium 25C survival rep1 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 25C survival rep1 12 days
3,462,246	+		CCNA_03293	0.73	-1.2
3,462,255	+		CCNA_03293	0.73	+0.3
3,462,255	+		CCNA_03293	0.73	-2.5
3,462,265	+		CCNA_03293	0.74	+0.4
3,462,277	+		CCNA_03293	0.74	-0.8
3,462,286	+		CCNA_03293	0.75	-0.9
3,462,286	+		CCNA_03293	0.75	+0.0
3,462,286	+		CCNA_03293	0.75	-1.6
3,462,286	+		CCNA_03293	0.75	-2.5
3,462,286	+		CCNA_03293	0.75	-0.7
3,462,288	+		CCNA_03293	0.75	-0.8
3,462,294	-		CCNA_03293	0.75	+3.1
3,462,294	-		CCNA_03293	0.75	-1.1
3,462,294	-		CCNA_03293	0.75	-0.1
3,462,296	-		CCNA_03293	0.75	-1.6
3,462,303	+		CCNA_03293	0.76	-0.2
3,462,316	-		CCNA_03293	0.76	+1.4
3,462,320	-		CCNA_03293	0.76	-0.4
3,462,320	-		CCNA_03293	0.76	-0.7
3,462,363	+		CCNA_03293	0.79	+2.5
3,462,382	-		CCNA_03293	0.79	-0.7
3,462,393	-		CCNA_03293	0.80	+0.6
3,462,429	+		CCNA_03293	0.82	-0.3
3,462,437	-		CCNA_03293	0.82	-0.6
3,462,488	+		CCNA_03293	0.85	-3.2
3,462,488	+		CCNA_03293	0.85	-1.9
3,462,488	+		CCNA_03293	0.85	-1.8
3,462,488	+		CCNA_03293	0.85	-0.6
3,462,488	+		CCNA_03293	0.85	-0.6
3,462,488	+		CCNA_03293	0.85	-0.2
3,462,496	-		CCNA_03293	0.85	-0.3
3,462,496	-		CCNA_03293	0.85	+0.3
3,462,496	-		CCNA_03293	0.85	-0.7
3,462,496	-		CCNA_03293	0.85	-0.6
3,462,496	-		CCNA_03293	0.85	-0.7
3,462,562	+		CCNA_03293	0.88	+0.7
3,462,562	+		CCNA_03293	0.88	+0.4
3,462,572	+		CCNA_03293	0.89	-0.7
3,462,573	+		CCNA_03293	0.89	-0.7
3,462,573	+		CCNA_03293	0.89	+0.2
3,462,581	-		CCNA_03293	0.89	-1.3
3,462,581	-		CCNA_03293	0.89	+0.3
3,462,581	-		CCNA_03293	0.89	+0.4
3,462,581	-		CCNA_03293	0.89	-0.9
3,462,627	+				+0.6
3,462,632	+				+2.7
3,462,632	+				-0.2
3,462,674	+				-0.2
3,462,686	+				+0.1
3,462,686	+				-2.0
3,462,694	-				-0.7
3,462,694	-				+0.1
3,462,694	-				-1.2
3,462,694	-				+0.9
3,462,694	-				+1.1
3,462,694	-				-1.3
3,462,694	-				-0.1
3,462,694	-				-0.2
3,462,703	-				+0.2
3,462,713	-				-0.7
3,462,796	-				-0.9
3,462,838	+				-2.0
3,462,870	+				-2.8
3,462,870	+				+2.1
3,462,870	+				-0.1
3,462,878	-				-0.7
3,462,878	-				-0.2
3,462,906	+				-0.3
3,462,958	+				+0.5
3,463,092	+				+0.3
3,463,116	+				-0.7
3,463,165	+				-0.1
3,463,173	-				-2.6
3,463,173	-				+0.9
3,463,173	-				-1.3
3,463,226	-				-0.1
3,463,240	-				+0.3
3,463,241	+				-0.5
3,463,241	+				-0.5
3,463,245	-				+1.1
3,463,254	-				-0.2
3,463,273	-				-0.5
3,463,273	-				+2.0
3,463,273	-				+0.1
3,463,286	+				+1.1
3,463,337	+				+0.4
3,463,342	+				-2.6
3,463,342	+				+0.5
3,463,362	-		CCNA_03294	0.11	-0.2
3,463,369	+		CCNA_03294	0.12	+0.1
3,463,369	+		CCNA_03294	0.12	+0.5
3,463,370	+		CCNA_03294	0.12	-0.9
3,463,377	-		CCNA_03294	0.13	-1.3
3,463,377	-		CCNA_03294	0.13	+1.0
3,463,382	+		CCNA_03294	0.13	+2.1
3,463,388	-		CCNA_03294	0.14	+1.0
3,463,390	+		CCNA_03294	0.14	-0.2
3,463,400	-		CCNA_03294	0.15	-3.0
3,463,407	-		CCNA_03294	0.15	-0.6
3,463,415	+		CCNA_03294	0.16	-0.5
3,463,429	+		CCNA_03294	0.17	-0.2
3,463,436	-		CCNA_03294	0.18	+0.2
3,463,439	+		CCNA_03294	0.18	+0.5
3,463,442	-		CCNA_03294	0.18	-1.0
3,463,442	-		CCNA_03294	0.18	+0.5
3,463,442	-		CCNA_03294	0.18	-1.1
3,463,442	-		CCNA_03294	0.18	-0.2
3,463,447	-		CCNA_03294	0.18	-0.4
3,463,447	-		CCNA_03294	0.18	-0.8
3,463,447	-		CCNA_03294	0.18	+0.2
3,463,497	-		CCNA_03294	0.22	+0.6
3,463,499	+		CCNA_03294	0.23	-0.5
3,463,507	-		CCNA_03294	0.23	-0.5
3,463,510	+		CCNA_03294	0.24	-0.5
3,463,543	-		CCNA_03294	0.26	+0.6
3,463,544	+		CCNA_03294	0.26	-0.6
3,463,544	+		CCNA_03294	0.26	-1.2
3,463,552	-		CCNA_03294	0.27	-0.3
3,463,552	-		CCNA_03294	0.27	-1.3
3,463,552	-		CCNA_03294	0.27	+1.4
3,463,552	-		CCNA_03294	0.27	-1.1
3,463,552	-		CCNA_03294	0.27	-1.4
3,463,554	+		CCNA_03294	0.27	-2.7
3,463,557	-		CCNA_03294	0.27	+0.6
3,463,557	-		CCNA_03294	0.27	+0.7
3,463,562	-		CCNA_03294	0.28	-0.2
3,463,569	+		CCNA_03294	0.28	-0.9
3,463,577	-		CCNA_03294	0.29	-1.2
3,463,592	-		CCNA_03294	0.30	+1.1
3,463,661	+		CCNA_03294	0.36	+1.8
3,463,668	-		CCNA_03294	0.36	-0.6
3,463,678	-		CCNA_03294	0.37	-0.7
3,463,678	-		CCNA_03294	0.37	-3.1
3,463,678	-		CCNA_03294	0.37	+1.5
3,463,713	-		CCNA_03294	0.40	-3.5
3,463,718	+		CCNA_03294	0.41	+1.1
3,463,776	+		CCNA_03294	0.45	-1.2
3,463,796	+		CCNA_03294	0.47	-0.5
3,463,837	+		CCNA_03294	0.50	-0.0
3,463,837	+		CCNA_03294	0.50	-1.1
3,463,854	-		CCNA_03294	0.52	-0.2
3,463,868	+		CCNA_03294	0.53	-0.9
3,463,868	+		CCNA_03294	0.53	+1.1
3,463,868	+		CCNA_03294	0.53	-1.0
3,463,876	-		CCNA_03294	0.53	-1.8
3,463,882	+		CCNA_03294	0.54	-0.5
3,463,887	+		CCNA_03294	0.54	+0.1
3,463,887	-		CCNA_03294	0.54	-0.2
3,463,895	-		CCNA_03294	0.55	-0.5
3,463,895	-		CCNA_03294	0.55	-1.9
3,463,924	+		CCNA_03294	0.57	+1.1
3,463,927	-		CCNA_03294	0.58	-0.2
3,463,932	-		CCNA_03294	0.58	-1.1
3,463,944	+		CCNA_03294	0.59	+2.1
3,463,952	-		CCNA_03294	0.60	-2.4
3,463,952	-		CCNA_03294	0.60	-0.5
3,463,980	-		CCNA_03294	0.62	+0.8
3,463,997	-		CCNA_03294	0.63	-0.4
3,464,034	-		CCNA_03294	0.66	+0.1
3,464,034	-		CCNA_03294	0.66	-0.7
3,464,036	+		CCNA_03294	0.66	-0.7
3,464,044	+		CCNA_03294	0.67	+2.1
3,464,044	-		CCNA_03294	0.67	+0.4
3,464,044	-		CCNA_03294	0.67	+0.4
3,464,044	-		CCNA_03294	0.67	-0.1
3,464,044	-		CCNA_03294	0.67	+1.4
3,464,044	-		CCNA_03294	0.67	-0.9
3,464,057	+		CCNA_03294	0.68	-0.7
3,464,057	+		CCNA_03294	0.68	-0.7
3,464,057	+		CCNA_03294	0.68	-1.0
3,464,078	+		CCNA_03294	0.70	+0.8
3,464,114	-		CCNA_03294	0.73	-1.7
3,464,116	+		CCNA_03294	0.73	-1.2
3,464,118	-		CCNA_03294	0.73	+0.8
3,464,120	+		CCNA_03294	0.73	+0.9
3,464,120	+		CCNA_03294	0.73	-1.0
3,464,159	+		CCNA_03294	0.76	-2.4
3,464,162	-		CCNA_03294	0.77	-1.5
3,464,162	-		CCNA_03294	0.77	-2.7
3,464,188	+		CCNA_03294	0.79	+0.1
3,464,188	+		CCNA_03294	0.79	-1.7
3,464,196	-		CCNA_03294	0.79	-1.5
3,464,196	-		CCNA_03294	0.79	+0.9
3,464,224	+		CCNA_03294	0.82	+1.1
3,464,225	-		CCNA_03294	0.82	-1.1
3,464,232	-		CCNA_03294	0.82	-0.2
3,464,252	+		CCNA_03294	0.84	-0.2
3,464,260	+		CCNA_03294	0.85	+0.5
3,464,290	+		CCNA_03294	0.87	+0.1
3,464,290	+		CCNA_03294	0.87	-0.7
3,464,293	-		CCNA_03294	0.87	-0.6
3,464,300	+		CCNA_03294	0.88	-0.2
3,464,300	+		CCNA_03294	0.88	+0.5
3,464,300	+		CCNA_03294	0.88	+0.8
3,464,303	-		CCNA_03294	0.88	+1.3
3,464,303	-		CCNA_03294	0.88	-2.1
3,464,307	+		CCNA_03294	0.89	-0.7
3,464,308	-		CCNA_03294	0.89	+0.5
3,464,308	-		CCNA_03294	0.89	+0.5
3,464,308	-		CCNA_03294	0.89	-2.4
3,464,378	-				-0.7
3,464,403	+				+2.1
3,464,423	+				+1.1
3,464,431	-				-0.1
3,464,452	-				-3.0
3,464,457	-				-0.2
3,464,482	+				-1.6
3,464,487	+				-1.1
3,464,495	-				+1.4
3,464,495	-				-0.3
3,464,495	-				-0.8
3,464,623	+				+0.8
3,464,645	+				-1.2
3,464,691	-				+0.0
3,464,691	-				-0.1
3,464,718	-				+0.3
3,464,769	+		CCNA_03295	0.10	-2.2
3,464,790	-		CCNA_03295	0.11	-1.1
3,464,819	+		CCNA_03295	0.13	+0.4
3,464,819	-		CCNA_03295	0.13	-0.3
3,464,936	-		CCNA_03295	0.19	-0.1
3,464,940	-		CCNA_03295	0.19	-1.2
3,464,969	-		CCNA_03295	0.21	-0.6
3,465,015	-		CCNA_03295	0.23	-0.4
3,465,060	-		CCNA_03295	0.25	+0.2
3,465,062	+		CCNA_03295	0.25	-0.1
3,465,077	-		CCNA_03295	0.26	-0.5
3,465,096	+		CCNA_03295	0.27	+1.9
3,465,096	+		CCNA_03295	0.27	+0.1
3,465,096	+		CCNA_03295	0.27	+1.2
3,465,104	-		CCNA_03295	0.28	-1.3
3,465,104	-		CCNA_03295	0.28	-0.2
3,465,133	+		CCNA_03295	0.29	-1.3
3,465,146	-		CCNA_03295	0.30	-1.1
3,465,153	-		CCNA_03295	0.30	-0.5
3,465,183	-		CCNA_03295	0.32	-0.5
3,465,196	-		CCNA_03295	0.32	-0.7
3,465,207	+		CCNA_03295	0.33	-0.8
3,465,207	+		CCNA_03295	0.33	-2.0
3,465,211	-		CCNA_03295	0.33	-1.3
3,465,212	+		CCNA_03295	0.33	-0.7
3,465,212	+		CCNA_03295	0.33	+1.5
3,465,241	+		CCNA_03295	0.35	-0.5
3,465,252	+		CCNA_03295	0.35	-0.2
3,465,255	-		CCNA_03295	0.35	+0.1
3,465,280	+		CCNA_03295	0.37	+0.1
3,465,280	-		CCNA_03295	0.37	-1.1
3,465,287	+		CCNA_03295	0.37	+1.4
3,465,287	+		CCNA_03295	0.37	-0.2
3,465,287	+		CCNA_03295	0.37	+2.4
3,465,295	-		CCNA_03295	0.37	-1.3
3,465,325	-		CCNA_03295	0.39	-0.8
3,465,325	-		CCNA_03295	0.39	-0.7
3,465,325	-		CCNA_03295	0.39	-2.0
3,465,341	+		CCNA_03295	0.40	-3.1
3,465,354	-		CCNA_03295	0.41	+0.5
3,465,369	+		CCNA_03295	0.41	-3.7
3,465,389	-		CCNA_03295	0.42	-1.5
3,465,398	+		CCNA_03295	0.43	-1.3
3,465,409	+		CCNA_03295	0.43	+0.4
3,465,409	+		CCNA_03295	0.43	-2.4
3,465,409	+		CCNA_03295	0.43	+0.3
3,465,417	-		CCNA_03295	0.44	+0.5
3,465,417	-		CCNA_03295	0.44	+2.2
3,465,441	+		CCNA_03295	0.45	-0.2
3,465,441	+		CCNA_03295	0.45	+0.1