Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03187

Experiment: PYE_noCalcium 25C survival rep1 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 25C survival rep1 12 days
3,346,653	+				+0.1
3,346,683	-		CCNA_03186	0.18	-0.2
3,346,696	-		CCNA_03186	0.19	-0.3
3,346,716	+		CCNA_03186	0.21	+1.0
3,346,724	-		CCNA_03186	0.21	+1.5
3,346,724	-		CCNA_03186	0.21	+0.7
3,346,746	+		CCNA_03186	0.23	-2.7
3,346,747	-		CCNA_03186	0.23	+0.4
3,346,752	-		CCNA_03186	0.24	-0.3
3,346,754	+		CCNA_03186	0.24	-2.0
3,346,788	-		CCNA_03186	0.27	+1.0
3,346,802	+		CCNA_03186	0.28	+0.1
3,346,802	+		CCNA_03186	0.28	-0.2
3,346,802	+		CCNA_03186	0.28	+0.1
3,346,802	+		CCNA_03186	0.28	+0.5
3,346,802	+		CCNA_03186	0.28	+1.2
3,346,810	-		CCNA_03186	0.29	-0.1
3,346,810	-		CCNA_03186	0.29	-0.7
3,346,810	-		CCNA_03186	0.29	+0.1
3,346,810	-		CCNA_03186	0.29	+0.3
3,346,810	-		CCNA_03186	0.29	+0.5
3,346,810	-		CCNA_03186	0.29	-0.2
3,346,830	-		CCNA_03186	0.31	-0.2
3,346,852	+		CCNA_03186	0.33	+1.8
3,346,855	-		CCNA_03186	0.33	+1.4
3,346,894	+		CCNA_03186	0.36	+1.1
3,346,897	-		CCNA_03186	0.37	+1.4
3,346,911	-		CCNA_03186	0.38	+0.1
3,346,920	-		CCNA_03186	0.39	-0.5
3,346,949	+		CCNA_03186	0.41	+0.1
3,346,950	+		CCNA_03186	0.41	-1.5
3,346,957	-		CCNA_03186	0.42	-0.6
3,346,957	-		CCNA_03186	0.42	-1.3
3,346,964	-		CCNA_03186	0.43	-0.2
3,347,022	+		CCNA_03186	0.48	-1.9
3,347,024	-		CCNA_03186	0.48	+0.3
3,347,032	+		CCNA_03186	0.49	+0.5
3,347,102	-		CCNA_03186	0.55	-0.2
3,347,106	+		CCNA_03186	0.55	-1.6
3,347,114	-		CCNA_03186	0.56	-0.0
3,347,121	+		CCNA_03186	0.57	+2.1
3,347,129	+		CCNA_03186	0.58	-1.0
3,347,220	-		CCNA_03186	0.66	-1.0
3,347,226	+		CCNA_03186	0.66	+0.7
3,347,234	-		CCNA_03186	0.67	-1.5
3,347,239	-		CCNA_03186	0.67	-1.0
3,347,239	-		CCNA_03186	0.67	-0.8
3,347,239	-		CCNA_03186	0.67	+3.1
3,347,239	-		CCNA_03186	0.67	+0.2
3,347,239	-		CCNA_03186	0.67	-0.6
3,347,246	-		CCNA_03186	0.68	-1.3
3,347,268	-		CCNA_03186	0.70	-1.0
3,347,303	+		CCNA_03186	0.73	+0.5
3,347,309	+		CCNA_03186	0.74	-0.2
3,347,311	-		CCNA_03186	0.74	-1.6
3,347,336	-		CCNA_03186	0.76	-0.3
3,347,352	-		CCNA_03186	0.78	+0.1
3,347,353	-		CCNA_03186	0.78	-1.5
3,347,435	+		CCNA_03186	0.85	-2.0
3,347,435	+		CCNA_03186	0.85	-0.7
3,347,458	-		CCNA_03186	0.87	+0.7
3,347,499	+				+0.9
3,347,509	+				+0.7
3,347,517	-				+0.9
3,347,551	+				-0.1
3,347,559	-				-0.6
3,347,675	+				-0.6
3,347,691	+				+1.6
3,347,708	-				-0.6
3,347,712	-				-0.7
3,347,730	+				-1.8
3,347,736	+				-0.6
3,347,744	-		CCNA_03187	0.10	+1.1
3,347,746	+		CCNA_03187	0.10	-0.6
3,347,783	+		CCNA_03187	0.14	-2.5
3,347,879	+		CCNA_03187	0.24	-0.5
3,347,917	+		CCNA_03187	0.28	-1.1
3,347,947	-		CCNA_03187	0.32	-0.9
3,347,955	+		CCNA_03187	0.32	-2.1
3,347,977	-		CCNA_03187	0.35	+0.5
3,347,992	+		CCNA_03187	0.36	+0.0
3,348,014	+		CCNA_03187	0.39	-1.4
3,348,014	+		CCNA_03187	0.39	-1.6
3,348,022	-		CCNA_03187	0.39	+1.1
3,348,040	+		CCNA_03187	0.41	-2.0
3,348,045	+		CCNA_03187	0.42	-1.6
3,348,052	+		CCNA_03187	0.43	-0.3
3,348,067	-		CCNA_03187	0.44	+0.5
3,348,100	+		CCNA_03187	0.48	-0.8
3,348,105	+		CCNA_03187	0.48	-1.6
3,348,105	+		CCNA_03187	0.48	-1.9
3,348,144	-		CCNA_03187	0.52	+0.5
3,348,197	+		CCNA_03187	0.58	-1.3
3,348,218	+		CCNA_03187	0.60	-3.1
3,348,227	+		CCNA_03187	0.61	-1.7
3,348,227	+		CCNA_03187	0.61	-1.2
3,348,235	-		CCNA_03187	0.62	-0.2
3,348,236	-		CCNA_03187	0.62	-1.3
3,348,323	+		CCNA_03187	0.71	-0.5
3,348,323	+		CCNA_03187	0.71	-1.0
3,348,324	+		CCNA_03187	0.71	+0.2
3,348,324	+		CCNA_03187	0.71	-1.8
3,348,324	+		CCNA_03187	0.71	-0.7
3,348,324	+		CCNA_03187	0.71	-2.2
3,348,324	+		CCNA_03187	0.71	-2.2
3,348,324	+		CCNA_03187	0.71	-1.7
3,348,324	+		CCNA_03187	0.71	-0.6
3,348,331	-		CCNA_03187	0.72	-1.1
3,348,332	-		CCNA_03187	0.72	-0.4
3,348,332	-		CCNA_03187	0.72	-1.5
3,348,347	-		CCNA_03187	0.73	-2.6
3,348,355	+		CCNA_03187	0.74	+0.3
3,348,369	+		CCNA_03187	0.76	-1.0
3,348,384	+		CCNA_03187	0.77	+0.1
3,348,384	+		CCNA_03187	0.77	-1.5
3,348,391	-		CCNA_03187	0.78	-2.3
3,348,392	-		CCNA_03187	0.78	-1.2
3,348,392	-		CCNA_03187	0.78	-2.7
3,348,440	+		CCNA_03187	0.83	-0.5
3,348,448	-		CCNA_03187	0.84	-0.9
3,348,458	-		CCNA_03187	0.85	-1.5
3,348,466	+		CCNA_03187	0.86	-1.1
3,348,474	-		CCNA_03187	0.87	-0.7
3,348,474	-		CCNA_03187	0.87	-0.5
3,348,490	-		CCNA_03187	0.88	-2.3
3,348,499	+		CCNA_03187	0.89	+0.3
3,348,563	+				+0.4
3,348,593	+				-0.0
3,348,593	+				+0.8
3,348,601	-				-0.9
3,348,601	-				-0.5
3,348,601	-				+0.5
3,348,601	-				-1.0
3,348,663	-				-0.7
3,348,756	+				-1.9
3,348,756	+				-0.5
3,348,756	+				-2.5
3,348,756	+				+1.1
3,348,764	-				+0.4
3,348,764	-				-0.0
3,348,764	-				+1.9
3,348,764	-				-0.9
3,348,815	+				-0.2
3,348,842	+				+0.4
3,348,865	-				+0.1
3,348,870	-				-0.2
3,348,888	+				+1.1
3,348,888	-				-1.7
3,348,902	-				-1.0
3,348,919	+				+0.5
3,348,919	+				-1.5
3,348,922	-				+0.6
3,348,927	-				-0.2
3,348,927	-				-0.6
3,348,927	-				+0.7
3,348,927	-				-1.7
3,348,927	-				-1.7
3,348,941	+		CCNA_03188	0.11	+0.2
3,348,951	+		CCNA_03188	0.12	-2.0
3,348,959	-		CCNA_03188	0.13	-2.1
3,348,959	-		CCNA_03188	0.13	-0.6
3,348,982	-		CCNA_03188	0.15	-0.4
3,348,982	-		CCNA_03188	0.15	-1.6
3,348,991	+		CCNA_03188	0.16	+1.3
3,348,991	+		CCNA_03188	0.16	+0.5
3,348,991	+		CCNA_03188	0.16	-2.5
3,348,999	-		CCNA_03188	0.16	-0.2
3,348,999	-		CCNA_03188	0.16	-1.5
3,349,041	+		CCNA_03188	0.20	-2.7
3,349,095	+		CCNA_03188	0.25	+0.5
3,349,095	+		CCNA_03188	0.25	-0.8
3,349,120	-		CCNA_03188	0.27	-1.5
3,349,125	-		CCNA_03188	0.27	-3.6
3,349,150	+		CCNA_03188	0.29	-0.5
3,349,158	-		CCNA_03188	0.30	-1.2
3,349,158	-		CCNA_03188	0.30	-2.0
3,349,160	+		CCNA_03188	0.30	+0.6
3,349,164	-		CCNA_03188	0.31	-1.0
3,349,230	-		CCNA_03188	0.36	-1.6
3,349,281	+		CCNA_03188	0.41	+0.5
3,349,284	-		CCNA_03188	0.41	+0.9
3,349,289	+		CCNA_03188	0.42	+0.8
3,349,289	-		CCNA_03188	0.42	+0.1
3,349,289	-		CCNA_03188	0.42	-0.1
3,349,325	-		CCNA_03188	0.45	-2.5
3,349,327	+		CCNA_03188	0.45	-0.5
3,349,358	+		CCNA_03188	0.48	+2.1
3,349,358	+		CCNA_03188	0.48	+1.4
3,349,366	-		CCNA_03188	0.48	-0.6
3,349,374	+		CCNA_03188	0.49	+0.5
3,349,378	-		CCNA_03188	0.49	-1.9
3,349,382	-		CCNA_03188	0.50	-0.2
3,349,395	+		CCNA_03188	0.51	-1.2
3,349,410	-		CCNA_03188	0.52	-1.2
3,349,430	-		CCNA_03188	0.54	-0.6
3,349,435	-		CCNA_03188	0.54	-2.0
3,349,453	+		CCNA_03188	0.56	-1.7
3,349,484	+		CCNA_03188	0.59	+1.0
3,349,489	+		CCNA_03188	0.59	-1.0
3,349,489	+		CCNA_03188	0.59	+0.5
3,349,576	+		CCNA_03188	0.67	-0.2