Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02615

Experiment: PYE_noCalcium 25C survival rep1 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 25C survival rep1 12 days
2,761,802	+		CCNA_02614	0.12	+0.0
2,761,810	-		CCNA_02614	0.13	-2.9
2,761,811	+		CCNA_02614	0.13	-2.5
2,761,812	-		CCNA_02614	0.13	-0.3
2,761,814	+		CCNA_02614	0.13	-1.1
2,761,828	+		CCNA_02614	0.15	-0.8
2,761,970	+		CCNA_02614	0.29	-1.0
2,761,976	+		CCNA_02614	0.29	-1.3
2,762,011	-		CCNA_02614	0.33	-2.2
2,762,011	-		CCNA_02614	0.33	-1.7
2,762,040	-		CCNA_02614	0.36	-1.6
2,762,049	-		CCNA_02614	0.37	-3.4
2,762,050	-		CCNA_02614	0.37	-2.0
2,762,089	-		CCNA_02614	0.41	-1.1
2,762,132	+		CCNA_02614	0.45	+0.0
2,762,140	-		CCNA_02614	0.46	-3.4
2,762,147	-		CCNA_02614	0.46	-3.3
2,762,147	-		CCNA_02614	0.46	-2.1
2,762,162	-		CCNA_02614	0.48	-2.0
2,762,166	-		CCNA_02614	0.48	-3.2
2,762,174	+		CCNA_02614	0.49	-2.1
2,762,181	+		CCNA_02614	0.50	-1.3
2,762,189	+		CCNA_02614	0.51	+0.0
2,762,218	-		CCNA_02614	0.53	-2.6
2,762,264	-		CCNA_02614	0.58	-1.8
2,762,354	-		CCNA_02614	0.67	-3.1
2,762,354	-		CCNA_02614	0.67	-3.0
2,762,365	-		CCNA_02614	0.68	-1.9
2,762,367	+		CCNA_02614	0.68	+0.3
2,762,394	-		CCNA_02614	0.71	-2.4
2,762,452	-		CCNA_02614	0.77	-3.2
2,762,479	+		CCNA_02614	0.79	+1.3
2,762,526	+		CCNA_02614	0.84	-1.9
2,762,664	+				+1.3
2,762,664	+				+1.3
2,762,672	-				-3.1
2,762,672	-				-1.3
2,762,680	+				-0.5
2,762,741	-				+0.8
2,762,762	-				-0.1
2,762,767	-				+0.3
2,762,795	+				-1.0
2,762,805	+				-0.3
2,762,808	-				+0.5
2,762,813	-				-0.4
2,762,860	+				-0.3
2,762,861	-				-0.6
2,762,861	-				-3.6
2,762,861	-				-0.7
2,762,861	-				-1.7
2,762,861	-				-2.1
2,762,861	-				-3.8
2,762,947	+		CCNA_02615	0.11	-1.0
2,762,983	-		CCNA_02615	0.14	-1.8
2,762,984	+		CCNA_02615	0.14	+0.7
2,762,984	+		CCNA_02615	0.14	-0.3
2,763,017	-		CCNA_02615	0.17	-0.8
2,763,077	-		CCNA_02615	0.22	-1.8
2,763,179	+		CCNA_02615	0.29	+0.0
2,763,179	+		CCNA_02615	0.29	-1.8
2,763,201	+		CCNA_02615	0.31	+1.3
2,763,201	+		CCNA_02615	0.31	-0.3
2,763,201	+		CCNA_02615	0.31	+1.3
2,763,201	+		CCNA_02615	0.31	-1.4
2,763,201	+		CCNA_02615	0.31	+0.7
2,763,201	+		CCNA_02615	0.31	+1.3
2,763,209	-		CCNA_02615	0.32	-4.7
2,763,209	-		CCNA_02615	0.32	-4.2
2,763,209	-		CCNA_02615	0.32	-2.7
2,763,209	-		CCNA_02615	0.32	-4.6
2,763,209	-		CCNA_02615	0.32	-3.8
2,763,224	+		CCNA_02615	0.33	-1.7
2,763,231	-		CCNA_02615	0.34	-4.7
2,763,231	-		CCNA_02615	0.34	-2.5
2,763,232	-		CCNA_02615	0.34	-3.2
2,763,233	+		CCNA_02615	0.34	-0.5
2,763,233	+		CCNA_02615	0.34	-1.1
2,763,233	+		CCNA_02615	0.34	+0.0
2,763,233	+		CCNA_02615	0.34	+1.3
2,763,233	+		CCNA_02615	0.34	-0.8
2,763,233	+		CCNA_02615	0.34	-1.3
2,763,241	-		CCNA_02615	0.34	-1.7
2,763,241	-		CCNA_02615	0.34	-2.3
2,763,241	-		CCNA_02615	0.34	-3.9
2,763,241	-		CCNA_02615	0.34	-1.4
2,763,241	-		CCNA_02615	0.34	-2.2
2,763,241	-		CCNA_02615	0.34	-3.4
2,763,241	-		CCNA_02615	0.34	-2.6
2,763,246	-		CCNA_02615	0.35	-2.6
2,763,264	-		CCNA_02615	0.36	-2.6
2,763,280	-		CCNA_02615	0.37	-3.1
2,763,280	-		CCNA_02615	0.37	-2.0
2,763,290	+		CCNA_02615	0.38	+0.0
2,763,322	-		CCNA_02615	0.41	-2.5
2,763,346	-		CCNA_02615	0.43	-3.1
2,763,423	-		CCNA_02615	0.49	-2.1
2,763,435	+		CCNA_02615	0.50	+1.0
2,763,435	+		CCNA_02615	0.50	+0.7
2,763,471	-		CCNA_02615	0.52	-4.2
2,763,473	+		CCNA_02615	0.53	+0.7
2,763,474	+		CCNA_02615	0.53	+0.7
2,763,501	+		CCNA_02615	0.55	+1.3
2,763,519	+		CCNA_02615	0.56	-2.4
2,763,529	-		CCNA_02615	0.57	-3.9
2,763,554	+		CCNA_02615	0.59	-0.8
2,763,567	-		CCNA_02615	0.60	-3.4
2,763,569	+		CCNA_02615	0.60	+0.0
2,763,580	+		CCNA_02615	0.61	+2.3
2,763,588	-		CCNA_02615	0.62	-2.6
2,763,644	-		CCNA_02615	0.66	-3.5
2,763,657	+		CCNA_02615	0.67	-2.3
2,763,691	+		CCNA_02615	0.70	-3.2
2,763,699	-		CCNA_02615	0.70	-2.5
2,763,699	-		CCNA_02615	0.70	-0.7
2,763,717	-		CCNA_02615	0.72	-3.4
2,763,799	+		CCNA_02615	0.78	-2.0
2,763,855	-		CCNA_02615	0.82	-2.9
2,763,855	-		CCNA_02615	0.82	-1.9
2,763,859	+		CCNA_02615	0.83	-1.9
2,763,865	-		CCNA_02615	0.83	-3.7
2,763,876	+				+2.3
2,763,894	-		CCNA_02615	0.85	-3.2
2,763,928	-		CCNA_02615	0.88	-2.7
2,764,150	-				+0.3
2,764,160	-				+0.1
2,764,162	-				-0.1
2,764,194	+				-2.6
2,764,197	+				-1.0
2,764,199	+				-1.5
2,764,207	-				+0.0
2,764,248	-				+0.6
2,764,249	-				-0.2
2,764,291	+				-1.0
2,764,307	-				-2.2
2,764,307	-				-2.4
2,764,317	-				-2.6
2,764,319	-				-2.3
2,764,319	-				-1.6
2,764,334	+				+0.3
2,764,346	-				-1.4
2,764,352	-				-2.9
2,764,352	-				-2.1
2,764,392	+		CCNA_02616	0.13	-0.5
2,764,463	+		CCNA_02616	0.20	+1.3
2,764,504	+		CCNA_02616	0.24	+0.3
2,764,504	+		CCNA_02616	0.24	-0.5
2,764,504	+		CCNA_02616	0.24	-2.0
2,764,504	+		CCNA_02616	0.24	-0.8
2,764,512	-		CCNA_02616	0.24	-2.2
2,764,512	-		CCNA_02616	0.24	-1.5
2,764,512	-		CCNA_02616	0.24	-2.1
2,764,512	-		CCNA_02616	0.24	-2.1
2,764,512	-		CCNA_02616	0.24	-2.3
2,764,544	-		CCNA_02616	0.27	-1.6
2,764,561	+		CCNA_02616	0.29	+1.3
2,764,576	-		CCNA_02616	0.30	-1.7
2,764,576	-		CCNA_02616	0.30	-2.1
2,764,576	-		CCNA_02616	0.30	-2.1
2,764,595	-		CCNA_02616	0.32	-1.6
2,764,606	-		CCNA_02616	0.33	-0.7
2,764,614	+		CCNA_02616	0.34	-0.7
2,764,614	+		CCNA_02616	0.34	+2.3
2,764,614	+		CCNA_02616	0.34	+1.3
2,764,614	+		CCNA_02616	0.34	+1.3
2,764,622	-		CCNA_02616	0.35	-1.8
2,764,622	-		CCNA_02616	0.35	-2.6
2,764,636	-		CCNA_02616	0.36	-0.8
2,764,688	-				+0.0
2,764,694	-		CCNA_02616	0.41	-2.4
2,764,713	-		CCNA_02616	0.43	-3.6
2,764,715	+		CCNA_02616	0.43	+2.3
2,764,759	+		CCNA_02616	0.47	+2.3
2,764,789	-		CCNA_02616	0.50	-1.1
2,764,820	-		CCNA_02616	0.53	-1.6
2,764,867	-		CCNA_02616	0.57	-2.0
2,764,871	+		CCNA_02616	0.58	+2.3
2,764,871	+		CCNA_02616	0.58	+1.3
2,764,871	+		CCNA_02616	0.58	+1.3
2,764,871	+		CCNA_02616	0.58	+0.7
2,764,876	+		CCNA_02616	0.58	+2.3
2,764,879	-		CCNA_02616	0.59	-2.0
2,764,879	-		CCNA_02616	0.59	-3.3
2,764,892	-		CCNA_02616	0.60	-2.2
2,764,892	-		CCNA_02616	0.60	-2.2
2,764,895	+		CCNA_02616	0.60	+2.3
2,764,902	-		CCNA_02616	0.61	-2.2
2,764,902	-		CCNA_02616	0.61	-1.3
2,764,973	-		CCNA_02616	0.67	-2.2
2,764,973	-		CCNA_02616	0.67	-2.4
2,765,027	+		CCNA_02616	0.72	-0.5
2,765,056	-		CCNA_02616	0.75	-1.6