Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02190

Experiment: PYE_noCalcium 25C survival rep1 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 25C survival rep1 12 days
2,339,912	+		CCNA_02188	0.71	+0.8
2,339,920	-		CCNA_02188	0.73	+2.3
2,339,948	+		CCNA_02188	0.79	-0.1
2,339,956	-		CCNA_02188	0.80	+0.1
2,339,975	-		CCNA_02188	0.84	-0.7
2,339,997	+		CCNA_02188	0.89	+0.0
2,340,050	-				+1.3
2,340,179	+		CCNA_02189	0.16	-0.9
2,340,181	+		CCNA_02189	0.16	+0.2
2,340,189	-		CCNA_02189	0.17	-2.1
2,340,197	-		CCNA_02189	0.18	+0.7
2,340,208	-		CCNA_02189	0.20	+1.7
2,340,215	+		CCNA_02189	0.21	-0.8
2,340,232	+		CCNA_02189	0.23	-1.7
2,340,248	+		CCNA_02189	0.25	+0.3
2,340,249	+		CCNA_02189	0.25	+0.7
2,340,257	-		CCNA_02189	0.26	-1.4
2,340,271	+		CCNA_02189	0.28	+0.3
2,340,399	+		CCNA_02189	0.44	+0.3
2,340,417	+		CCNA_02189	0.47	+0.9
2,340,490	+		CCNA_02189	0.56	+0.8
2,340,498	-		CCNA_02189	0.57	-0.6
2,340,549	+		CCNA_02189	0.64	+0.1
2,340,558	+		CCNA_02189	0.65	+0.7
2,340,600	+		CCNA_02189	0.70	+3.3
2,340,689	+		CCNA_02189	0.82	+0.1
2,340,692	+		CCNA_02189	0.82	-0.3
2,340,697	+		CCNA_02189	0.83	-1.3
2,340,697	+		CCNA_02189	0.83	+0.6
2,340,705	-		CCNA_02189	0.84	+0.4
2,340,705	-		CCNA_02189	0.84	-0.7
2,340,722	-		CCNA_02189	0.86	-1.3
2,340,722	-		CCNA_02189	0.86	+0.7
2,340,754	+				-0.5
2,340,754	+				+0.8
2,340,762	-				+0.3
2,340,762	-				-0.5
2,340,762	-				+0.1
2,340,762	-				-1.4
2,340,765	+				-1.0
2,340,765	+				-0.6
2,340,765	+				-2.6
2,340,765	+				-0.7
2,340,765	+				-0.9
2,340,765	+				-0.2
2,340,773	-				+0.8
2,340,773	-				+0.0
2,340,773	-				-2.0
2,340,773	-				-0.9
2,340,791	-				+1.3
2,340,798	+				-1.1
2,340,805	-				+0.5
2,340,841	+				-0.3
2,340,841	+				-3.1
2,340,848	+				+0.3
2,340,849	-				+1.3
2,340,849	-				-0.0
2,340,867	+				+0.7
2,340,874	+				-0.3
2,340,874	+				+0.5
2,340,882	-				+1.0
2,340,898	+				+0.3
2,340,936	+				-0.9
2,340,951	+				-0.3
2,340,955	-				+2.3
2,340,956	+				-1.4
2,341,062	+				-1.7
2,341,098	-				-0.5
2,341,221	+		CCNA_02190	0.15	-2.8
2,341,221	+		CCNA_02190	0.15	-2.9
2,341,221	+		CCNA_02190	0.15	-3.2
2,341,221	+		CCNA_02190	0.15	-0.4
2,341,221	+		CCNA_02190	0.15	-2.4
2,341,229	-		CCNA_02190	0.15	-1.7
2,341,231	-		CCNA_02190	0.15	+2.3
2,341,243	-		CCNA_02190	0.16	-1.4
2,341,260	+		CCNA_02190	0.16	-1.3
2,341,277	+		CCNA_02190	0.17	-1.7
2,341,285	-		CCNA_02190	0.18	-0.0
2,341,307	+		CCNA_02190	0.19	+1.3
2,341,325	-		CCNA_02190	0.19	-2.1
2,341,331	-		CCNA_02190	0.20	-0.4
2,341,342	+		CCNA_02190	0.20	-2.6
2,341,366	-		CCNA_02190	0.21	-1.2
2,341,371	-		CCNA_02190	0.22	-0.2
2,341,403	+		CCNA_02190	0.23	-2.1
2,341,464	+		CCNA_02190	0.26	+0.7
2,341,473	-		CCNA_02190	0.26	+0.7
2,341,500	-		CCNA_02190	0.28	-1.6
2,341,537	-		CCNA_02190	0.29	-1.4
2,341,542	+		CCNA_02190	0.30	-1.3
2,341,549	+		CCNA_02190	0.30	-0.9
2,341,557	+		CCNA_02190	0.30	-1.4
2,341,591	+		CCNA_02190	0.32	-0.6
2,341,601	+		CCNA_02190	0.32	-3.6
2,341,609	-		CCNA_02190	0.33	-1.3
2,341,625	+		CCNA_02190	0.34	-0.7
2,341,651	+		CCNA_02190	0.35	-1.9
2,341,687	+		CCNA_02190	0.36	-1.3
2,341,758	+		CCNA_02190	0.40	-1.4
2,341,763	+		CCNA_02190	0.40	-0.8
2,341,763	+		CCNA_02190	0.40	-1.6
2,341,763	+		CCNA_02190	0.40	-1.5
2,341,763	+		CCNA_02190	0.40	-0.9
2,341,943	+		CCNA_02190	0.48	-2.7
2,342,014	+		CCNA_02190	0.52	-1.5
2,342,035	+		CCNA_02190	0.53	-1.5
2,342,055	-		CCNA_02190	0.54	+0.7
2,342,060	-		CCNA_02190	0.54	+1.3
2,342,072	+		CCNA_02190	0.54	-1.6
2,342,131	+		CCNA_02190	0.57	-3.0
2,342,141	+		CCNA_02190	0.58	-1.1
2,342,164	+		CCNA_02190	0.59	-1.9
2,342,177	+		CCNA_02190	0.59	-2.0
2,342,185	-		CCNA_02190	0.60	-0.3
2,342,211	-		CCNA_02190	0.61	+0.7
2,342,263	+		CCNA_02190	0.63	+0.2
2,342,263	+		CCNA_02190	0.63	-2.9
2,342,263	+		CCNA_02190	0.63	-2.8
2,342,263	+		CCNA_02190	0.63	-3.0
2,342,271	-		CCNA_02190	0.64	-1.0
2,342,271	-		CCNA_02190	0.64	+0.7
2,342,279	-		CCNA_02190	0.64	-1.4
2,342,307	+		CCNA_02190	0.65	-2.0
2,342,315	-		CCNA_02190	0.66	-3.7
2,342,325	-		CCNA_02190	0.66	-0.5
2,342,356	+		CCNA_02190	0.68	-2.2
2,342,369	+		CCNA_02190	0.68	-2.2
2,342,377	-		CCNA_02190	0.69	-0.7
2,342,400	+		CCNA_02190	0.70	-0.4
2,342,416	-		CCNA_02190	0.71	+2.3
2,342,425	+		CCNA_02190	0.71	-2.4
2,342,464	+		CCNA_02190	0.73	-0.8
2,342,472	-		CCNA_02190	0.73	-1.9
2,342,472	-		CCNA_02190	0.73	+1.3
2,342,481	+		CCNA_02190	0.74	-2.9
2,342,487	-		CCNA_02190	0.74	-0.0
2,342,489	-		CCNA_02190	0.74	-1.4
2,342,489	-		CCNA_02190	0.74	-1.7
2,342,491	+		CCNA_02190	0.74	-2.6
2,342,491	+		CCNA_02190	0.74	-1.1
2,342,499	-		CCNA_02190	0.74	-0.0
2,342,499	-		CCNA_02190	0.74	-0.7
2,342,554	+		CCNA_02190	0.77	-1.5
2,342,562	-		CCNA_02190	0.77	-0.0
2,342,572	-		CCNA_02190	0.78	+2.3
2,342,620	+		CCNA_02190	0.80	-0.8
2,342,628	-		CCNA_02190	0.80	+0.7
2,342,647	+		CCNA_02190	0.81	-1.0
2,342,650	-		CCNA_02190	0.81	+2.3
2,342,660	-		CCNA_02190	0.82	-2.2
2,342,673	-		CCNA_02190	0.83	-2.6
2,342,709	-		CCNA_02190	0.84	-2.1
2,342,709	-		CCNA_02190	0.84	-1.4
2,342,711	+		CCNA_02190	0.84	-0.7
2,342,724	-		CCNA_02190	0.85	+0.7
2,342,726	+		CCNA_02190	0.85	-2.5
2,342,734	-		CCNA_02190	0.85	-1.3
2,342,734	-		CCNA_02190	0.85	-1.2
2,342,755	-		CCNA_02190	0.86	-1.2
2,342,775	+		CCNA_02190	0.87	-1.2
2,342,804	+		CCNA_02190	0.89	-1.8
2,342,812	-		CCNA_02190	0.89	-1.7
2,342,812	-		CCNA_02190	0.89	-1.7
2,342,845	+				-1.3
2,342,851	-				+0.3
2,342,860	-				-0.0
2,342,974	-				-2.8
2,342,975	-				+2.3
2,342,981	+				-1.8
2,343,109	+				+0.0
2,343,187	+		CCNA_02191	0.16	+1.2
2,343,192	+		CCNA_02191	0.17	+0.5
2,343,200	-		CCNA_02191	0.19	-1.2
2,343,210	-		CCNA_02191	0.21	-0.3
2,343,210	-		CCNA_02191	0.21	-0.7
2,343,316	-		CCNA_02191	0.49	+1.3
2,343,316	-		CCNA_02191	0.49	-0.5
2,343,434	-		CCNA_02191	0.79	-0.7
2,343,436	-		CCNA_02191	0.80	-0.1
2,343,457	+		CCNA_02191	0.85	-0.5
2,343,462	+		CCNA_02191	0.87	-1.6
2,343,462	+		CCNA_02191	0.87	-0.5
2,343,470	-		CCNA_02191	0.89	-0.5
2,343,470	-		CCNA_02191	0.89	-0.2
2,343,486	-				-0.9
2,343,507	+				+0.1
2,343,515	-				-1.1
2,343,515	-				-1.0
2,343,613	-		CCNA_02192	0.30	-0.2
2,343,632	+		CCNA_02192	0.34	-2.0
2,343,632	+		CCNA_02192	0.34	+0.3
2,343,632	+		CCNA_02192	0.34	-0.3
2,343,640	-		CCNA_02192	0.36	+1.6
2,343,640	-		CCNA_02192	0.36	-0.1
2,343,654	-		CCNA_02192	0.39	-0.7
2,343,706	+		CCNA_02192	0.51	-0.3
2,343,708	-		CCNA_02192	0.51	-0.3
2,343,714	-		CCNA_02192	0.53	-1.0
2,343,715	-		CCNA_02192	0.53	-0.0
2,343,775	+		CCNA_02192	0.67	-0.0
2,343,778	-		CCNA_02192	0.67	+1.1
2,343,784	+		CCNA_02192	0.69	-1.4
2,343,805	+		CCNA_02192	0.73	-1.0
2,343,813	-		CCNA_02192	0.75	-0.4
2,343,815	+		CCNA_02192	0.76	+1.3
2,343,850	+		CCNA_02192	0.84	-0.5
2,343,854	-		CCNA_02192	0.85	-1.6
2,343,903	+				+0.3
2,343,911	-				-1.1
2,343,911	-				-0.7
2,343,911	-				-0.7
2,343,911	-				-0.3
2,343,946	+		CCNA_02193	0.13	+1.0
2,344,045	+		CCNA_02193	0.31	-1.4