Experiment: nitrate (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23200 and BWI76_RS23205 are separated by 91 nucleotides BWI76_RS23205 and BWI76_RS23210 are separated by 148 nucleotides
BWI76_RS23200: BWI76_RS23200 - propionate kinase, at 4,832,182 to 4,833,396
_RS23200
BWI76_RS23205: BWI76_RS23205 - propanediol utilization protein PduX, at 4,833,488 to 4,834,354
_RS23205
BWI76_RS23210: BWI76_RS23210 - threonine-phosphate decarboxylase, at 4,834,503 to 4,835,582
_RS23210
Position (kb)
4833
4834
4835 Strain fitness (log2 ratio)
-1
0
1 at 4832.711 kb on + strand, within BWI76_RS23200 at 4832.898 kb on + strand, within BWI76_RS23200 at 4832.933 kb on + strand, within BWI76_RS23200 at 4832.967 kb on + strand, within BWI76_RS23200 at 4833.292 kb on - strand at 4833.292 kb on - strand at 4833.309 kb on + strand at 4833.363 kb on + strand at 4833.580 kb on + strand, within BWI76_RS23205 at 4833.670 kb on + strand, within BWI76_RS23205 at 4833.745 kb on + strand, within BWI76_RS23205 at 4833.863 kb on - strand, within BWI76_RS23205 at 4833.887 kb on + strand, within BWI76_RS23205 at 4834.041 kb on - strand, within BWI76_RS23205 at 4834.336 kb on - strand at 4834.338 kb on + strand at 4834.340 kb on + strand at 4834.346 kb on - strand at 4834.348 kb on + strand at 4834.348 kb on + strand at 4834.536 kb on - strand at 4834.599 kb on - strand at 4834.697 kb on + strand, within BWI76_RS23210 at 4834.701 kb on + strand, within BWI76_RS23210 at 4835.216 kb on + strand, within BWI76_RS23210
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate (N) remove 4,832,711 + BWI76_RS23200 0.44 -0.1 4,832,898 + BWI76_RS23200 0.59 -0.3 4,832,933 + BWI76_RS23200 0.62 +0.0 4,832,967 + BWI76_RS23200 0.65 -1.0 4,833,292 - -0.1 4,833,292 - -0.7 4,833,309 + +0.1 4,833,363 + +0.4 4,833,580 + BWI76_RS23205 0.11 -0.4 4,833,670 + BWI76_RS23205 0.21 -0.0 4,833,745 + BWI76_RS23205 0.30 -1.5 4,833,863 - BWI76_RS23205 0.43 +0.5 4,833,887 + BWI76_RS23205 0.46 +0.1 4,834,041 - BWI76_RS23205 0.64 -0.1 4,834,336 - +0.0 4,834,338 + -1.0 4,834,340 + -0.1 4,834,346 - -0.8 4,834,348 + -0.3 4,834,348 + -0.4 4,834,536 - +0.2 4,834,599 - -0.3 4,834,697 + BWI76_RS23210 0.18 -0.8 4,834,701 + BWI76_RS23210 0.18 -0.1 4,835,216 + BWI76_RS23210 0.66 -0.7
Or see this region's nucleotide sequence