Experiment: nitrate (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS17335 and BWI76_RS17340 are separated by 396 nucleotides BWI76_RS17340 and BWI76_RS17345 are separated by 311 nucleotides
BWI76_RS17335: BWI76_RS17335 - nitrate reductase subunit alpha, at 3,588,308 to 3,592,051
_RS17335
BWI76_RS17340: BWI76_RS17340 - NarK family nitrate/nitrite MFS transporter, at 3,592,448 to 3,593,836
_RS17340
BWI76_RS17345: BWI76_RS17345 - nitrate/nitrite two-component system sensor histidine kinase NarX, at 3,594,148 to 3,595,926
_RS17345
Position (kb)
3592
3593
3594 Strain fitness (log2 ratio)
-2
-1
0
1 at 3591.522 kb on + strand, within BWI76_RS17335 at 3591.916 kb on + strand at 3591.958 kb on + strand at 3592.001 kb on + strand at 3592.009 kb on - strand at 3592.054 kb on + strand at 3592.054 kb on + strand at 3592.061 kb on + strand at 3592.064 kb on + strand at 3592.069 kb on - strand at 3592.071 kb on + strand at 3592.079 kb on - strand at 3592.080 kb on - strand at 3592.087 kb on - strand at 3592.116 kb on + strand at 3592.286 kb on + strand at 3592.311 kb on + strand at 3592.319 kb on - strand at 3592.344 kb on + strand at 3592.461 kb on + strand at 3592.471 kb on - strand at 3592.471 kb on - strand at 3592.502 kb on - strand at 3592.505 kb on - strand at 3592.541 kb on + strand at 3592.549 kb on - strand at 3592.549 kb on - strand at 3592.549 kb on - strand at 3592.634 kb on + strand, within BWI76_RS17340 at 3592.652 kb on + strand, within BWI76_RS17340 at 3592.711 kb on + strand, within BWI76_RS17340 at 3592.747 kb on + strand, within BWI76_RS17340 at 3593.089 kb on - strand, within BWI76_RS17340 at 3593.420 kb on - strand, within BWI76_RS17340 at 3593.531 kb on - strand, within BWI76_RS17340 at 3593.651 kb on - strand at 3593.832 kb on + strand at 3593.842 kb on + strand at 3594.265 kb on + strand at 3594.273 kb on - strand at 3594.325 kb on - strand at 3594.618 kb on + strand, within BWI76_RS17345
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate (N) remove 3,591,522 + BWI76_RS17335 0.86 -0.0 3,591,916 + +0.3 3,591,958 + -2.0 3,592,001 + +0.1 3,592,009 - +0.4 3,592,054 + +0.1 3,592,054 + -0.2 3,592,061 + +0.1 3,592,064 + +0.0 3,592,069 - +0.1 3,592,071 + -0.5 3,592,079 - +0.3 3,592,080 - -0.6 3,592,087 - -1.9 3,592,116 + +0.2 3,592,286 + -1.6 3,592,311 + +0.5 3,592,319 - +0.1 3,592,344 + -0.8 3,592,461 + -1.2 3,592,471 - -0.1 3,592,471 - -0.3 3,592,502 - -0.3 3,592,505 - +0.1 3,592,541 + -0.3 3,592,549 - -0.1 3,592,549 - -0.3 3,592,549 - -0.0 3,592,634 + BWI76_RS17340 0.13 -0.0 3,592,652 + BWI76_RS17340 0.15 -0.1 3,592,711 + BWI76_RS17340 0.19 -0.5 3,592,747 + BWI76_RS17340 0.22 +0.2 3,593,089 - BWI76_RS17340 0.46 -0.5 3,593,420 - BWI76_RS17340 0.70 +0.2 3,593,531 - BWI76_RS17340 0.78 -0.1 3,593,651 - -1.1 3,593,832 + +0.3 3,593,842 + -0.0 3,594,265 + -0.7 3,594,273 - +0.1 3,594,325 - -0.3 3,594,618 + BWI76_RS17345 0.26 -0.8
Or see this region's nucleotide sequence