Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS13665

Experiment: nitrate (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS13660 and BWI76_RS13665 overlap by 4 nucleotidesBWI76_RS13665 and BWI76_RS13670 are separated by 97 nucleotides BWI76_RS13660: BWI76_RS13660 - nitrate reductase subunit beta, at 2,846,829 to 2,848,373 _RS13660 BWI76_RS13665: BWI76_RS13665 - nitrate reductase subunit alpha, at 2,848,370 to 2,852,110 _RS13665 BWI76_RS13670: BWI76_RS13670 - NarK family nitrate/nitrite MFS transporter, at 2,852,208 to 2,853,596 _RS13670 Position (kb) 2848 2849 2850 2851 2852 2853Strain fitness (log2 ratio) -3 -2 -1 0 1at 2847.946 kb on - strand, within BWI76_RS13660at 2848.318 kb on - strandat 2848.556 kb on + strandat 2849.102 kb on - strand, within BWI76_RS13665at 2849.318 kb on + strand, within BWI76_RS13665at 2849.786 kb on - strand, within BWI76_RS13665at 2849.891 kb on + strand, within BWI76_RS13665at 2850.103 kb on - strand, within BWI76_RS13665at 2850.442 kb on + strand, within BWI76_RS13665at 2850.452 kb on + strand, within BWI76_RS13665at 2850.452 kb on + strand, within BWI76_RS13665at 2850.765 kb on - strand, within BWI76_RS13665at 2851.241 kb on - strand, within BWI76_RS13665at 2851.581 kb on + strand, within BWI76_RS13665at 2851.730 kb on + strand, within BWI76_RS13665at 2851.812 kb on - strandat 2851.866 kb on - strandat 2852.101 kb on - strandat 2852.266 kb on + strandat 2852.580 kb on - strand, within BWI76_RS13670at 2852.709 kb on - strand, within BWI76_RS13670at 2852.887 kb on - strand, within BWI76_RS13670at 2852.909 kb on + strand, within BWI76_RS13670at 2853.073 kb on - strand, within BWI76_RS13670at 2853.099 kb on + strand, within BWI76_RS13670at 2853.099 kb on + strand, within BWI76_RS13670at 2853.099 kb on + strand, within BWI76_RS13670at 2853.104 kb on + strand, within BWI76_RS13670at 2853.106 kb on + strand, within BWI76_RS13670at 2853.107 kb on - strand, within BWI76_RS13670

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Per-strain Table

Position Strand Gene LocusTag Fraction nitrate (N)
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2,847,946 - BWI76_RS13660 0.72 +0.1
2,848,318 - -0.5
2,848,556 + +1.0
2,849,102 - BWI76_RS13665 0.20 -0.1
2,849,318 + BWI76_RS13665 0.25 -0.7
2,849,786 - BWI76_RS13665 0.38 -0.1
2,849,891 + BWI76_RS13665 0.41 +1.2
2,850,103 - BWI76_RS13665 0.46 +0.7
2,850,442 + BWI76_RS13665 0.55 +0.7
2,850,452 + BWI76_RS13665 0.56 +0.8
2,850,452 + BWI76_RS13665 0.56 -0.1
2,850,765 - BWI76_RS13665 0.64 -0.3
2,851,241 - BWI76_RS13665 0.77 +0.2
2,851,581 + BWI76_RS13665 0.86 +0.7
2,851,730 + BWI76_RS13665 0.90 +0.1
2,851,812 - -0.0
2,851,866 - -0.7
2,852,101 - -0.4
2,852,266 + -0.4
2,852,580 - BWI76_RS13670 0.27 +0.3
2,852,709 - BWI76_RS13670 0.36 -0.0
2,852,887 - BWI76_RS13670 0.49 -1.8
2,852,909 + BWI76_RS13670 0.50 +0.0
2,853,073 - BWI76_RS13670 0.62 -0.6
2,853,099 + BWI76_RS13670 0.64 +0.2
2,853,099 + BWI76_RS13670 0.64 -0.2
2,853,099 + BWI76_RS13670 0.64 -1.6
2,853,104 + BWI76_RS13670 0.65 -0.3
2,853,106 + BWI76_RS13670 0.65 -0.3
2,853,107 - BWI76_RS13670 0.65 -3.1

Or see this region's nucleotide sequence