Experiment: nitrate (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13645 and BWI76_RS13650 are separated by 129 nucleotides BWI76_RS13650 and BWI76_RS13655 overlap by 4 nucleotides BWI76_RS13655 and BWI76_RS13660 overlap by 1 nucleotides
BWI76_RS13645: BWI76_RS13645 - N-hydroxyarylamine O-acetyltransferase, at 2,844,482 to 2,845,327
_RS13645
BWI76_RS13650: BWI76_RS13650 - respiratory nitrate reductase subunit gamma, at 2,845,457 to 2,846,137
_RS13650
BWI76_RS13655: BWI76_RS13655 - nitrate reductase molybdenum cofactor assembly chaperone, at 2,846,134 to 2,846,829
_RS13655
BWI76_RS13660: BWI76_RS13660 - nitrate reductase subunit beta, at 2,846,829 to 2,848,373
_RS13660
Position (kb)
2845
2846
2847 Strain fitness (log2 ratio)
-1
0
1 at 2844.531 kb on + strand at 2844.714 kb on - strand, within BWI76_RS13645 at 2844.732 kb on + strand, within BWI76_RS13645 at 2844.986 kb on - strand, within BWI76_RS13645 at 2845.315 kb on - strand at 2845.477 kb on + strand at 2845.479 kb on + strand at 2845.512 kb on + strand at 2845.653 kb on - strand, within BWI76_RS13650 at 2846.090 kb on + strand at 2846.096 kb on + strand at 2846.895 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate (N) remove 2,844,531 + +0.1 2,844,714 - BWI76_RS13645 0.27 +0.6 2,844,732 + BWI76_RS13645 0.30 -0.8 2,844,986 - BWI76_RS13645 0.60 -0.4 2,845,315 - -0.4 2,845,477 + +1.0 2,845,479 + -0.7 2,845,512 + +0.8 2,845,653 - BWI76_RS13650 0.29 +1.6 2,846,090 + +0.8 2,846,096 + -0.4 2,846,895 - -0.1
Or see this region's nucleotide sequence