Experiment: 3 day starvation, 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0249 and DvMF_0250 are separated by 52 nucleotides DvMF_0250 and DvMF_0251 are separated by 84 nucleotides
DvMF_0249: DvMF_0249 - glycosyl transferase family 9 (RefSeq), at 283,640 to 285,205
_0249
DvMF_0250: DvMF_0250 - CgeB family protein (RefSeq), at 285,258 to 287,207
_0250
DvMF_0251: DvMF_0251 - protein of unknown function DUF342 (RefSeq), at 287,292 to 288,437
_0251
Position (kb) 285
286
287
288 Strain fitness (log2 ratio) -1
0
1
2
3 at 284.328 kb on + strand, within DvMF_0249 at 284.328 kb on + strand, within DvMF_0249 at 284.338 kb on + strand, within DvMF_0249 at 284.425 kb on - strand, within DvMF_0249 at 284.512 kb on + strand, within DvMF_0249 at 284.574 kb on + strand, within DvMF_0249 at 284.634 kb on - strand, within DvMF_0249 at 284.690 kb on + strand, within DvMF_0249 at 285.200 kb on + strand at 285.200 kb on + strand at 285.328 kb on - strand at 285.592 kb on + strand, within DvMF_0250 at 285.722 kb on - strand, within DvMF_0250 at 285.897 kb on - strand, within DvMF_0250 at 285.988 kb on + strand, within DvMF_0250 at 286.102 kb on - strand, within DvMF_0250 at 286.263 kb on - strand, within DvMF_0250 at 286.658 kb on + strand, within DvMF_0250 at 286.658 kb on + strand, within DvMF_0250 at 286.676 kb on - strand, within DvMF_0250 at 286.708 kb on - strand, within DvMF_0250 at 287.101 kb on - strand at 287.712 kb on - strand, within DvMF_0251 at 287.764 kb on + strand, within DvMF_0251 at 287.772 kb on - strand, within DvMF_0251 at 287.904 kb on - strand, within DvMF_0251
Per-strain Table
Position Strand Gene LocusTag Fraction 3 day starvation, 30C remove 284,328 + DvMF_0249 0.44 +0.1 284,328 + DvMF_0249 0.44 -0.6 284,338 + DvMF_0249 0.45 -0.3 284,425 - DvMF_0249 0.50 +0.2 284,512 + DvMF_0249 0.56 -0.3 284,574 + DvMF_0249 0.60 +0.2 284,634 - DvMF_0249 0.63 +0.0 284,690 + DvMF_0249 0.67 +0.4 285,200 + +1.1 285,200 + +0.7 285,328 - +0.6 285,592 + DvMF_0250 0.17 +1.3 285,722 - DvMF_0250 0.24 +0.3 285,897 - DvMF_0250 0.33 +0.5 285,988 + DvMF_0250 0.37 +0.9 286,102 - DvMF_0250 0.43 +0.7 286,263 - DvMF_0250 0.52 +0.2 286,658 + DvMF_0250 0.72 +0.6 286,658 + DvMF_0250 0.72 +0.5 286,676 - DvMF_0250 0.73 +0.5 286,708 - DvMF_0250 0.74 +0.8 287,101 - +0.4 287,712 - DvMF_0251 0.37 +0.4 287,764 + DvMF_0251 0.41 +3.5 287,772 - DvMF_0251 0.42 +0.5 287,904 - DvMF_0251 0.53 +0.1
Or see this region's nucleotide sequence