Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3408

Experiment: m.b. Nalidixic 0.048 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.048 mg/ml
3,586,168	-		Dshi_3407	0.63	+0.3
3,586,175	+		Dshi_3407	0.63	+0.1
3,586,178	+		Dshi_3407	0.63	-0.6
3,586,215	-		Dshi_3407	0.65	+0.2
3,586,254	+		Dshi_3407	0.67	+0.0
3,586,255	+		Dshi_3407	0.67	-0.2
3,586,268	-		Dshi_3407	0.67	+0.2
3,586,317	+		Dshi_3407	0.70	-0.6
3,586,583	+		Dshi_3407	0.82	+0.5
3,586,606	-		Dshi_3407	0.83	+0.5
3,586,782	-				-0.3
3,586,813	+				-0.3
3,586,869	+				+0.2
3,586,974	-				-0.3
3,587,016	-				+0.1
3,587,067	+				+0.3
3,587,096	-		Dshi_3408	0.11	-0.7
3,587,174	+		Dshi_3408	0.18	-2.3
3,587,182	-		Dshi_3408	0.19	-0.5
3,587,412	-		Dshi_3408	0.38	+0.6
3,587,421	+		Dshi_3408	0.39	-1.5
3,587,429	-		Dshi_3408	0.40	-0.4
3,587,448	+		Dshi_3408	0.41	+0.2
3,587,456	-		Dshi_3408	0.42	-1.2
3,587,474	-		Dshi_3408	0.43	-0.5
3,587,748	+		Dshi_3408	0.67	+0.2
3,587,816	+		Dshi_3408	0.72	-0.7
3,587,824	-		Dshi_3408	0.73	+0.2
3,587,966	-		Dshi_3408	0.85	-0.8
3,588,150	-				-1.2
3,588,248	-		Dshi_3409	0.22	+0.3
3,588,361	+		Dshi_3409	0.46	-0.1
3,588,426	-		Dshi_3409	0.59	-0.4
3,588,433	-		Dshi_3409	0.60	-0.6
3,588,453	+		Dshi_3409	0.65	-0.6
3,588,461	-		Dshi_3409	0.66	+0.1
3,588,488	+		Dshi_3409	0.72	-1.9
3,588,493	+		Dshi_3409	0.73	-0.7
3,588,608	-				-0.7
3,588,679	+		Dshi_3410	0.10	-2.3
3,588,724	+		Dshi_3410	0.18	-0.5
3,588,754	-		Dshi_3410	0.23	-1.4
3,588,798	+		Dshi_3410	0.31	-1.0
3,588,799	+		Dshi_3410	0.31	-1.1
3,588,803	+		Dshi_3410	0.32	+2.0
3,588,844	+		Dshi_3410	0.39	-0.8
3,588,873	-		Dshi_3410	0.44	-0.3
3,588,891	-		Dshi_3410	0.47	-0.2
3,588,901	-		Dshi_3410	0.49	-1.1
3,588,924	-		Dshi_3410	0.53	-0.7
3,588,924	-		Dshi_3410	0.53	-0.0
3,588,935	+		Dshi_3410	0.55	+0.6
3,588,940	+		Dshi_3410	0.56	+0.4
3,588,948	-		Dshi_3410	0.57	+0.2
3,589,032	-		Dshi_3410	0.72	-0.4
3,589,055	-		Dshi_3410	0.76	-0.0