Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3205

Experiment: m.b. Nalidixic 0.048 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.048 mg/ml
3,369,014	+		Dshi_3204	0.40	-0.2
3,369,121	+		Dshi_3204	0.48	-0.3
3,369,153	+		Dshi_3204	0.50	-1.9
3,369,161	-		Dshi_3204	0.50	-0.6
3,369,161	-		Dshi_3204	0.50	+0.4
3,369,173	-		Dshi_3204	0.51	+2.3
3,369,176	+		Dshi_3204	0.51	-0.3
3,369,196	+		Dshi_3204	0.53	-2.2
3,369,204	-		Dshi_3204	0.53	-0.0
3,369,204	-		Dshi_3204	0.53	+1.5
3,369,218	+		Dshi_3204	0.54	+0.2
3,369,264	-		Dshi_3204	0.58	-0.2
3,369,284	+		Dshi_3204	0.59	-0.5
3,369,289	+		Dshi_3204	0.59	-0.3
3,369,294	-		Dshi_3204	0.60	-0.6
3,369,562	+		Dshi_3204	0.79	+0.1
3,369,575	-		Dshi_3204	0.80	-0.9
3,369,606	+		Dshi_3204	0.82	-0.4
3,369,617	+		Dshi_3204	0.83	-0.0
3,369,669	+		Dshi_3204	0.86	+0.2
3,369,669	+		Dshi_3204	0.86	+1.5
3,369,669	+		Dshi_3204	0.86	+0.1
3,369,669	+		Dshi_3204	0.86	-0.2
3,369,669	+		Dshi_3204	0.86	-0.1
3,369,669	+		Dshi_3204	0.86	+1.5
3,369,677	-		Dshi_3204	0.87	-0.8
3,369,677	-		Dshi_3204	0.87	-0.8
3,369,677	-		Dshi_3204	0.87	-0.2
3,369,677	-		Dshi_3204	0.87	-0.6
3,369,682	-		Dshi_3204	0.87	+1.2
3,369,705	+		Dshi_3204	0.89	-0.6
3,369,727	+				-0.0
3,369,727	+				+2.0
3,369,753	+				-0.1
3,369,756	+				+0.2
3,369,804	+				-0.5
3,369,812	-				-1.0
3,369,833	-				-0.4
3,369,834	-				-0.9
3,369,834	-				+0.5
3,369,869	-				-2.8
3,369,879	-				+2.5
3,369,879	-				+0.3
3,369,969	+				-0.8
3,369,969	+				+0.5
3,369,978	+				-0.8
3,369,978	+				+0.5
3,369,978	+				+0.3
3,369,978	+				+0.2
3,369,981	+				-1.6
3,369,986	-				-0.4
3,369,986	-				-0.3
3,369,992	-				-1.8
3,370,028	+				-0.3
3,370,038	+				-1.2
3,370,056	-		Dshi_3205	0.12	-0.8
3,370,056	-		Dshi_3205	0.12	-0.0
3,370,058	+		Dshi_3205	0.13	-0.0
3,370,151	-		Dshi_3205	0.39	-0.0
3,370,182	+		Dshi_3205	0.48	+0.5
3,370,189	+		Dshi_3205	0.50	-0.7
3,370,253	-		Dshi_3205	0.68	+0.1
3,370,284	-		Dshi_3205	0.77	+0.4
3,370,293	+		Dshi_3205	0.79	-0.3
3,370,300	-		Dshi_3205	0.81	-0.2
3,370,309	-		Dshi_3205	0.84	+0.8
3,370,309	-		Dshi_3205	0.84	-0.4
3,370,316	-		Dshi_3205	0.86	+0.2
3,370,333	+				-0.3
3,370,341	-				-3.2
3,370,377	-				-0.3
3,370,387	-				-1.8
3,370,388	+				-0.8
3,370,393	+				-0.0
3,370,393	+				+1.0
3,370,393	+				-0.2
3,370,393	+				-0.2
3,370,396	-				-0.2
3,370,396	-				-0.0
3,370,398	+				-0.1
3,370,401	-				-0.8
3,370,403	+				-0.2
3,370,423	+				+0.5
3,370,427	+				-1.3
3,370,438	-				-0.3
3,370,457	+				+0.5
3,370,503	-		Dshi_3206	0.14	+0.5
3,370,521	-		Dshi_3206	0.16	-0.5
3,370,591	+		Dshi_3206	0.23	-0.5
3,370,591	+		Dshi_3206	0.23	-0.7
3,370,614	+		Dshi_3206	0.26	-0.6
3,370,660	+		Dshi_3206	0.30	+0.8
3,370,755	+		Dshi_3206	0.40	-1.3
3,370,923	-		Dshi_3206	0.57	-0.8
3,370,942	-		Dshi_3206	0.59	-0.1
3,371,008	+		Dshi_3206	0.66	-0.3
3,371,081	+		Dshi_3206	0.73	-0.5
3,371,086	-		Dshi_3206	0.74	+1.5
3,371,100	-		Dshi_3206	0.75	-1.1
3,371,109	+		Dshi_3206	0.76	+0.6
3,371,109	+		Dshi_3206	0.76	-0.1
3,371,117	-		Dshi_3206	0.77	-0.2
3,371,131	-		Dshi_3206	0.78	-0.8
3,371,219	+		Dshi_3206	0.87	+0.6
3,371,227	-		Dshi_3206	0.88	-1.3
3,371,242	-		Dshi_3206	0.89	-1.5
3,371,249	+				-0.1
3,371,268	+				-0.8
3,371,277	+				-0.6
3,371,277	-				-0.2
3,371,285	-				-0.2