Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3189

Experiment: m.b. Nalidixic 0.048 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.048 mg/ml
3,351,529	+				-0.0
3,351,548	+				-0.8
3,351,583	-				-0.8
3,351,865	+		Dshi_3187	0.49	-1.6
3,351,875	+		Dshi_3187	0.51	-0.4
3,351,965	-		Dshi_3187	0.67	+0.3
3,351,994	-		Dshi_3187	0.72	-0.3
3,352,013	+				+0.6
3,352,034	+		Dshi_3187	0.79	-1.5
3,352,037	-		Dshi_3187	0.80	+0.6
3,352,067	+		Dshi_3187	0.85	-0.8
3,352,096	+				-1.0
3,352,096	+				-0.7
3,352,101	+				-0.2
3,352,104	-				+0.4
3,352,104	-				-0.2
3,352,104	-				+0.1
3,352,114	-				+0.7
3,352,141	+				-0.5
3,352,185	-		Dshi_3188	0.15	+0.2
3,352,263	-		Dshi_3188	0.44	-0.7
3,352,325	-		Dshi_3188	0.67	-0.8
3,352,349	-		Dshi_3188	0.76	-1.3
3,352,513	+		Dshi_3189	0.12	-0.8
3,352,514	+		Dshi_3189	0.12	+0.4
3,352,642	-		Dshi_3189	0.30	+0.9
3,352,647	-		Dshi_3189	0.31	-2.4
3,352,686	+		Dshi_3189	0.36	-0.1
3,352,706	-		Dshi_3189	0.39	-0.6
3,352,761	+		Dshi_3189	0.47	+0.6
3,352,769	-		Dshi_3189	0.48	-0.2
3,352,774	+		Dshi_3189	0.49	-0.8
3,352,817	-		Dshi_3189	0.55	-0.6
3,352,982	+		Dshi_3189	0.78	-0.1
3,352,985	+		Dshi_3189	0.78	-1.3
3,352,996	+		Dshi_3189	0.80	-0.4
3,353,038	-		Dshi_3189	0.86	-0.0
3,353,072	+				+0.3
3,353,140	-				-0.0
3,353,161	-				+1.1
3,353,161	-				-0.6
3,353,209	-				-0.8
3,353,219	+				+0.2
3,353,257	+				-0.8
3,353,286	-				-0.1
3,353,289	+				-0.0
3,353,312	-				+0.8
3,353,354	+		Dshi_3190	0.11	-1.3
3,353,402	-		Dshi_3190	0.15	-0.2
3,353,417	+		Dshi_3190	0.16	-1.2
3,353,424	-		Dshi_3190	0.17	-0.6
3,353,478	+		Dshi_3190	0.21	-1.2
3,353,533	-		Dshi_3190	0.26	-0.4
3,353,545	+		Dshi_3190	0.27	-0.4
3,353,548	-		Dshi_3190	0.27	-0.9
3,353,583	-		Dshi_3190	0.30	-0.4
3,353,638	-		Dshi_3190	0.34	-0.8
3,353,690	+		Dshi_3190	0.39	-1.4
3,353,698	+		Dshi_3190	0.39	+0.6
3,353,706	-		Dshi_3190	0.40	-2.0
3,353,721	-		Dshi_3190	0.41	-0.0
3,353,742	+		Dshi_3190	0.43	-0.6
3,353,749	-		Dshi_3190	0.43	-1.1
3,353,767	-		Dshi_3190	0.45	-0.9
3,353,784	-		Dshi_3190	0.46	+0.5
3,353,819	-		Dshi_3190	0.49	-1.2
3,353,902	+		Dshi_3190	0.56	-0.9
3,353,904	-		Dshi_3190	0.56	-1.2
3,353,910	-		Dshi_3190	0.57	-0.4
3,353,910	-		Dshi_3190	0.57	-0.3
3,353,940	-		Dshi_3190	0.59	-1.0
3,353,973	-		Dshi_3190	0.62	+0.1
3,353,973	-		Dshi_3190	0.62	-0.4
3,354,021	+		Dshi_3190	0.66	+1.1
3,354,080	-		Dshi_3190	0.71	+0.0
3,354,087	+		Dshi_3190	0.71	-2.8
3,354,103	+		Dshi_3190	0.72	-0.3