Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2323

Experiment: m.b. Nalidixic 0.048 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.048 mg/ml
2,453,532	+		Dshi_2321	0.51	-0.6
2,453,537	+		Dshi_2321	0.53	-0.3
2,453,540	-		Dshi_2321	0.53	-0.6
2,453,552	-		Dshi_2321	0.56	-0.4
2,453,584	-		Dshi_2321	0.62	+0.5
2,453,589	+		Dshi_2321	0.63	+0.6
2,453,589	+		Dshi_2321	0.63	+1.2
2,453,633	-		Dshi_2321	0.72	-1.0
2,453,704	+		Dshi_2321	0.87	-0.2
2,453,786	+				-0.6
2,453,824	-				-0.9
2,453,859	-		Dshi_2322	0.10	-1.4
2,453,910	-		Dshi_2322	0.17	-0.0
2,453,910	-		Dshi_2322	0.17	-1.5
2,454,061	-		Dshi_2322	0.39	+0.0
2,454,087	-		Dshi_2322	0.43	+0.8
2,454,087	-		Dshi_2322	0.43	+0.2
2,454,095	+		Dshi_2322	0.44	-0.3
2,454,291	-		Dshi_2322	0.72	-1.2
2,454,316	-		Dshi_2322	0.75	-0.8
2,454,343	+		Dshi_2322	0.79	+0.4
2,454,346	+		Dshi_2322	0.79	-0.6
2,454,456	+				-1.8
2,454,471	+				-0.4
2,454,477	-				+2.8
2,454,479	+				+0.9
2,454,487	-				-1.0
2,454,508	-				+0.8
2,454,530	+				-1.5
2,454,546	+				-0.2
2,454,573	-				-0.2
2,454,583	-		Dshi_2323	0.11	-0.5
2,454,663	+		Dshi_2323	0.21	-0.2
2,454,685	-		Dshi_2323	0.24	+0.2
2,454,802	+		Dshi_2323	0.40	-0.9
2,454,850	+		Dshi_2323	0.46	-0.1
2,454,850	-		Dshi_2323	0.46	-1.5
2,454,859	-		Dshi_2323	0.47	+0.5
2,454,864	-		Dshi_2323	0.48	-0.7
2,454,883	-		Dshi_2323	0.50	+2.1
2,454,898	+		Dshi_2323	0.52	-0.3
2,454,930	-		Dshi_2323	0.57	+0.4
2,454,971	-		Dshi_2323	0.62	-0.1
2,454,981	-		Dshi_2323	0.63	+0.5
2,454,986	-		Dshi_2323	0.64	+0.2
2,455,019	+		Dshi_2323	0.68	-0.1
2,455,036	-		Dshi_2323	0.70	-0.0
2,455,048	-		Dshi_2323	0.72	-0.5
2,455,129	+		Dshi_2323	0.83	-0.5
2,455,156	-		Dshi_2323	0.86	+0.2
2,455,260	-				-2.0
2,455,260	-				-0.4
2,455,263	-				+1.1
2,455,263	-				-0.5
2,455,346	-				+0.1
2,455,371	+				-0.7
2,455,411	-				-0.4
2,455,418	+				+0.5
2,455,527	+		Dshi_2324	0.24	-0.3
2,455,563	+		Dshi_2324	0.29	-0.5
2,455,596	-		Dshi_2324	0.34	-1.5
2,455,635	-		Dshi_2324	0.39	-0.4
2,455,635	-		Dshi_2324	0.39	+0.1
2,455,689	+		Dshi_2324	0.47	-0.9
2,455,694	+		Dshi_2324	0.47	-0.2
2,455,816	+		Dshi_2324	0.64	-1.4
2,455,817	-		Dshi_2324	0.64	+0.9
2,455,840	-		Dshi_2324	0.67	-0.2
2,455,869	-		Dshi_2324	0.71	-1.1
2,455,972	+		Dshi_2324	0.85	-1.0
2,456,006	+				+0.5
2,456,009	-				-1.0
2,456,046	+				-2.2
2,456,091	-				-0.2
2,456,125	+				-1.1
2,456,183	+				+1.2