Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2129

Experiment: m.b. Nalidixic 0.048 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.048 mg/ml
2,258,516	+		Dshi_2127	0.56	-0.0
2,258,524	-		Dshi_2127	0.57	-1.1
2,258,524	-		Dshi_2127	0.57	+2.4
2,258,559	+		Dshi_2127	0.63	+0.4
2,258,589	+		Dshi_2127	0.68	-1.2
2,258,594	+		Dshi_2127	0.69	-2.2
2,258,629	-		Dshi_2127	0.74	-0.3
2,258,803	-				-0.4
2,258,803	-				+0.3
2,258,979	+				+0.7
2,258,992	-				+0.3
2,259,028	+		Dshi_2128	0.11	+0.8
2,259,145	+		Dshi_2128	0.35	+0.5
2,259,182	+		Dshi_2128	0.43	-0.4
2,259,182	+		Dshi_2128	0.43	-0.6
2,259,253	+		Dshi_2128	0.57	+0.5
2,259,339	+		Dshi_2128	0.75	-1.2
2,259,357	-		Dshi_2128	0.79	-0.0
2,259,428	-				+0.1
2,259,443	+				-0.2
2,259,466	+				-2.1
2,259,518	+				-2.5
2,259,566	-				-4.3
2,259,600	+				-2.0
2,259,606	+				-2.8
2,259,672	+		Dshi_2129	0.13	-2.3
2,259,842	-		Dshi_2129	0.25	-2.7
2,259,852	-		Dshi_2129	0.26	-1.4
2,259,852	-		Dshi_2129	0.26	-3.9
2,259,858	-		Dshi_2129	0.26	-0.8
2,259,893	+		Dshi_2129	0.29	-2.8
2,259,948	-		Dshi_2129	0.33	-1.7
2,260,048	-		Dshi_2129	0.40	+0.8
2,260,093	+		Dshi_2129	0.43	-1.9
2,260,153	+		Dshi_2129	0.48	-1.0
2,260,237	-		Dshi_2129	0.54	+1.8
2,260,261	-		Dshi_2129	0.56	-2.9
2,260,350	-		Dshi_2129	0.62	-0.5
2,260,393	+		Dshi_2129	0.65	-3.3
2,260,407	+		Dshi_2129	0.66	-0.7
2,260,530	+		Dshi_2129	0.75	-2.4
2,260,812	-				-1.7
2,260,831	+				-1.2
2,260,862	+				-1.1
2,260,868	+				-1.0
2,260,870	-				+0.2
2,260,870	-				-0.9
2,260,870	-				-1.0
2,260,870	-				-0.7
2,260,876	-				-1.2
2,260,897	+				-1.1
2,261,063	+		Dshi_2130	0.31	+2.2
2,261,068	+		Dshi_2130	0.32	-0.5
2,261,087	+		Dshi_2130	0.35	-1.1
2,261,092	+		Dshi_2130	0.36	-2.1
2,261,258	+		Dshi_2130	0.66	-1.3
2,261,447	+				-0.9
2,261,456	-				-0.7
2,261,595	+				-0.5
2,261,676	-				-0.7
2,261,687	-				-0.9
2,261,809	+		Dshi_2131	0.10	-1.2
2,261,837	+		Dshi_2131	0.16	-0.8
2,261,837	+		Dshi_2131	0.16	-0.1