Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1133

Experiment: m.b. Nalidixic 0.048 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.048 mg/ml
1,157,730	-		Dshi_1131	0.11	+0.2
1,157,742	-		Dshi_1131	0.17	+0.3
1,157,893	+		Dshi_1131	0.88	+0.3
1,157,912	+				+0.5
1,157,912	+				-1.2
1,157,920	+				-0.7
1,157,966	+				-0.2
1,157,966	+				-0.6
1,157,966	+				+0.4
1,157,973	-				-0.1
1,157,974	-				+0.4
1,157,974	-				+2.3
1,157,974	-				-0.4
1,157,974	-				-1.2
1,158,116	+				-0.7
1,158,146	-				-0.7
1,158,147	-				-0.5
1,158,150	+				-0.9
1,158,150	+				-0.6
1,158,326	+		Dshi_1132	0.81	-1.6
1,158,349	+				+1.8
1,158,384	-				-0.7
1,158,384	-				+0.3
1,158,386	-				+0.4
1,158,390	-				+0.6
1,158,394	-				+0.1
1,158,395	-				-0.5
1,158,459	-				-1.3
1,158,459	-				+1.6
1,158,480	+				+0.8
1,158,491	+				+0.4
1,158,499	-				-0.7
1,158,561	+				-0.6
1,158,561	+				-1.5
1,158,569	-				-0.9
1,158,617	+				-0.3
1,158,687	+				-0.5
1,158,687	+				+0.8
1,158,695	-				-0.6
1,158,695	-				-0.8
1,158,695	-				-0.1
1,158,705	+				+0.2
1,158,772	+				-0.2
1,158,778	-		Dshi_1133	0.10	-0.9
1,158,796	-		Dshi_1133	0.12	-0.3
1,158,804	+		Dshi_1133	0.13	-1.2
1,158,821	+		Dshi_1133	0.15	-1.2
1,158,829	-		Dshi_1133	0.16	-0.1
1,158,861	-		Dshi_1133	0.20	-0.5
1,158,866	+		Dshi_1133	0.20	-0.5
1,158,866	-		Dshi_1133	0.20	-0.6
1,158,910	-		Dshi_1133	0.26	-1.4
1,158,972	+		Dshi_1133	0.33	-0.7
1,158,975	-		Dshi_1133	0.33	+0.3
1,159,058	+		Dshi_1133	0.43	-2.2
1,159,229	-		Dshi_1133	0.63	-0.5
1,159,230	-		Dshi_1133	0.63	-1.7
1,159,438	-		Dshi_1133	0.88	-0.9
1,160,078	+		Dshi_1134	0.71	-0.4
1,160,104	-		Dshi_1134	0.75	-1.0
1,160,214	+				-0.6
1,160,222	-				+0.6
1,160,251	+				-1.2
1,160,361	-				-1.1
1,160,397	-		Dshi_1135	0.11	-0.9
1,160,415	+		Dshi_1135	0.13	-1.1
1,160,415	+		Dshi_1135	0.13	-0.4
1,160,420	+		Dshi_1135	0.13	+1.2
1,160,423	-		Dshi_1135	0.14	-1.3
1,160,466	-		Dshi_1135	0.18	+0.1
1,160,477	-		Dshi_1135	0.19	-0.9
1,160,477	-		Dshi_1135	0.19	-0.7