Experiment: m.b. Nalidixic 0.048 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0967 and Dshi_0968 are separated by 96 nucleotides Dshi_0968 and Dshi_0969 overlap by 38 nucleotides
Dshi_0967: Dshi_0967 - fumarylacetoacetate (FAA) hydrolase (RefSeq), at 989,049 to 989,933
_0967
Dshi_0968: Dshi_0968 - YCII-related (RefSeq), at 990,030 to 990,485
_0968
Dshi_0969: Dshi_0969 - Mannitol dehydrogenase domain (RefSeq), at 990,448 to 991,947
_0969
Position (kb) 990
991 Strain fitness (log2 ratio) -2
-1
0
1
2 at 989.090 kb on + strand at 989.097 kb on + strand at 989.115 kb on - strand at 989.237 kb on + strand, within Dshi_0967 at 989.256 kb on + strand, within Dshi_0967 at 989.256 kb on + strand, within Dshi_0967 at 989.256 kb on + strand, within Dshi_0967 at 989.256 kb on + strand, within Dshi_0967 at 989.264 kb on - strand, within Dshi_0967 at 989.264 kb on - strand, within Dshi_0967 at 989.322 kb on + strand, within Dshi_0967 at 989.332 kb on - strand, within Dshi_0967 at 989.419 kb on + strand, within Dshi_0967 at 989.439 kb on - strand, within Dshi_0967 at 989.552 kb on - strand, within Dshi_0967 at 989.605 kb on + strand, within Dshi_0967 at 989.623 kb on - strand, within Dshi_0967 at 989.636 kb on + strand, within Dshi_0967 at 989.636 kb on + strand, within Dshi_0967 at 989.636 kb on + strand, within Dshi_0967 at 989.644 kb on - strand, within Dshi_0967 at 989.688 kb on + strand, within Dshi_0967 at 989.693 kb on + strand, within Dshi_0967 at 989.696 kb on - strand, within Dshi_0967 at 989.696 kb on - strand, within Dshi_0967 at 989.696 kb on - strand, within Dshi_0967 at 989.696 kb on - strand, within Dshi_0967 at 989.750 kb on - strand, within Dshi_0967 at 990.089 kb on + strand, within Dshi_0968 at 990.097 kb on - strand, within Dshi_0968 at 990.241 kb on + strand, within Dshi_0968 at 990.293 kb on + strand, within Dshi_0968 at 990.316 kb on + strand, within Dshi_0968 at 990.331 kb on + strand, within Dshi_0968 at 990.366 kb on + strand, within Dshi_0968 at 990.478 kb on + strand at 990.523 kb on + strand at 990.742 kb on + strand, within Dshi_0969 at 990.996 kb on - strand, within Dshi_0969 at 991.086 kb on - strand, within Dshi_0969 at 991.286 kb on + strand, within Dshi_0969 at 991.313 kb on - strand, within Dshi_0969 at 991.315 kb on + strand, within Dshi_0969
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.048 mg/ml remove 989,090 + -1.0 989,097 + -1.2 989,115 - -0.4 989,237 + Dshi_0967 0.21 +0.0 989,256 + Dshi_0967 0.23 +0.9 989,256 + Dshi_0967 0.23 -0.6 989,256 + Dshi_0967 0.23 -0.8 989,256 + Dshi_0967 0.23 +0.2 989,264 - Dshi_0967 0.24 +0.2 989,264 - Dshi_0967 0.24 +0.4 989,322 + Dshi_0967 0.31 +1.5 989,332 - Dshi_0967 0.32 +0.1 989,419 + Dshi_0967 0.42 -0.6 989,439 - Dshi_0967 0.44 -2.6 989,552 - Dshi_0967 0.57 -0.6 989,605 + Dshi_0967 0.63 -0.5 989,623 - Dshi_0967 0.65 +2.1 989,636 + Dshi_0967 0.66 -0.4 989,636 + Dshi_0967 0.66 -0.2 989,636 + Dshi_0967 0.66 -0.1 989,644 - Dshi_0967 0.67 -0.3 989,688 + Dshi_0967 0.72 -1.0 989,693 + Dshi_0967 0.73 +1.1 989,696 - Dshi_0967 0.73 +0.5 989,696 - Dshi_0967 0.73 +0.2 989,696 - Dshi_0967 0.73 -0.5 989,696 - Dshi_0967 0.73 +0.2 989,750 - Dshi_0967 0.79 +1.1 990,089 + Dshi_0968 0.13 -0.5 990,097 - Dshi_0968 0.15 -1.2 990,241 + Dshi_0968 0.46 -1.5 990,293 + Dshi_0968 0.58 -0.5 990,316 + Dshi_0968 0.63 -0.4 990,331 + Dshi_0968 0.66 -1.4 990,366 + Dshi_0968 0.74 -0.2 990,478 + -0.5 990,523 + -0.6 990,742 + Dshi_0969 0.20 +0.3 990,996 - Dshi_0969 0.37 +0.3 991,086 - Dshi_0969 0.43 -0.3 991,286 + Dshi_0969 0.56 -0.5 991,313 - Dshi_0969 0.58 -0.8 991,315 + Dshi_0969 0.58 +0.8
Or see this region's nucleotide sequence