Experiment: Phenylacetic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04230 and H281DRAFT_04231 are separated by 185 nucleotides H281DRAFT_04231 and H281DRAFT_04232 are separated by 164 nucleotides
H281DRAFT_04230: H281DRAFT_04230 - glycerol uptake facilitator protein, at 350,525 to 351,238
_04230
H281DRAFT_04231: H281DRAFT_04231 - haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED, at 351,424 to 352,110
_04231
H281DRAFT_04232: H281DRAFT_04232 - 3,4-dihydroxy 2-butanone 4-phosphate synthase, at 352,275 to 352,994
_04232
Position (kb) 351
352
353 Strain fitness (log2 ratio) -1
0
1
2 at 350.498 kb on + strand at 350.534 kb on + strand at 350.681 kb on + strand, within H281DRAFT_04230 at 350.682 kb on - strand, within H281DRAFT_04230 at 350.682 kb on - strand, within H281DRAFT_04230 at 350.682 kb on - strand, within H281DRAFT_04230 at 350.696 kb on + strand, within H281DRAFT_04230 at 350.778 kb on - strand, within H281DRAFT_04230 at 350.834 kb on + strand, within H281DRAFT_04230 at 350.972 kb on + strand, within H281DRAFT_04230 at 350.973 kb on - strand, within H281DRAFT_04230 at 351.215 kb on + strand at 351.216 kb on - strand at 351.216 kb on - strand at 351.221 kb on + strand at 351.221 kb on + strand at 351.222 kb on - strand at 351.346 kb on + strand at 351.347 kb on - strand at 351.347 kb on - strand at 351.458 kb on + strand at 351.459 kb on - strand at 351.459 kb on - strand at 351.856 kb on + strand, within H281DRAFT_04231 at 351.984 kb on + strand, within H281DRAFT_04231 at 352.108 kb on + strand at 352.131 kb on - strand at 352.262 kb on + strand at 352.263 kb on - strand at 352.487 kb on + strand, within H281DRAFT_04232 at 352.487 kb on + strand, within H281DRAFT_04232 at 352.487 kb on + strand, within H281DRAFT_04232 at 352.487 kb on + strand, within H281DRAFT_04232 at 352.982 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Phenylacetic (C) remove 350,498 + -0.1 350,534 + -0.3 350,681 + H281DRAFT_04230 0.22 -0.3 350,682 - H281DRAFT_04230 0.22 -0.6 350,682 - H281DRAFT_04230 0.22 +0.4 350,682 - H281DRAFT_04230 0.22 -1.0 350,696 + H281DRAFT_04230 0.24 -0.7 350,778 - H281DRAFT_04230 0.35 +0.8 350,834 + H281DRAFT_04230 0.43 -0.4 350,972 + H281DRAFT_04230 0.63 -0.0 350,973 - H281DRAFT_04230 0.63 -0.4 351,215 + -0.2 351,216 - +0.2 351,216 - -0.2 351,221 + -0.5 351,221 + -0.5 351,222 - -0.2 351,346 + -0.9 351,347 - +0.1 351,347 - +0.0 351,458 + -0.2 351,459 - +2.6 351,459 - +0.1 351,856 + H281DRAFT_04231 0.63 -0.7 351,984 + H281DRAFT_04231 0.82 +0.5 352,108 + +1.2 352,131 - +0.1 352,262 + +0.0 352,263 - +1.0 352,487 + H281DRAFT_04232 0.29 -0.1 352,487 + H281DRAFT_04232 0.29 +0.4 352,487 + H281DRAFT_04232 0.29 -0.2 352,487 + H281DRAFT_04232 0.29 +0.5 352,982 + -0.2
Or see this region's nucleotide sequence