Experiment: Phenylacetic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02434 and H281DRAFT_02435 are separated by 363 nucleotides H281DRAFT_02435 and H281DRAFT_02436 are separated by 18 nucleotides
H281DRAFT_02434: H281DRAFT_02434 - Predicted O-linked N-acetylglucosamine transferase, SPINDLY family, at 605,843 to 608,317
_02434
H281DRAFT_02435: H281DRAFT_02435 - protein FliT, at 608,681 to 608,980
_02435
H281DRAFT_02436: H281DRAFT_02436 - flagellar hook-associated protein 2, at 608,999 to 610,525
_02436
Position (kb) 608
609 Strain fitness (log2 ratio) -2
-1
0
1 at 607.720 kb on + strand, within H281DRAFT_02434 at 607.977 kb on - strand, within H281DRAFT_02434 at 608.028 kb on + strand at 608.029 kb on - strand, within H281DRAFT_02434 at 608.041 kb on - strand, within H281DRAFT_02434 at 608.136 kb on + strand at 608.339 kb on + strand at 608.340 kb on - strand at 608.340 kb on - strand at 608.340 kb on - strand at 608.416 kb on - strand at 608.596 kb on + strand at 608.597 kb on - strand at 608.597 kb on - strand at 608.597 kb on - strand at 608.597 kb on - strand at 608.597 kb on - strand at 609.001 kb on - strand at 609.001 kb on - strand at 609.001 kb on - strand at 609.057 kb on + strand at 609.118 kb on - strand at 609.118 kb on - strand at 609.142 kb on - strand at 609.142 kb on - strand at 609.510 kb on + strand, within H281DRAFT_02436 at 609.550 kb on - strand, within H281DRAFT_02436 at 609.635 kb on - strand, within H281DRAFT_02436 at 609.883 kb on + strand, within H281DRAFT_02436
Per-strain Table
Position Strand Gene LocusTag Fraction Phenylacetic (C) remove 607,720 + H281DRAFT_02434 0.76 -1.1 607,977 - H281DRAFT_02434 0.86 -1.1 608,028 + -0.2 608,029 - H281DRAFT_02434 0.88 -0.3 608,041 - H281DRAFT_02434 0.89 -0.0 608,136 + -0.1 608,339 + +0.0 608,340 - +1.1 608,340 - -0.1 608,340 - +0.5 608,416 - -0.4 608,596 + +0.4 608,597 - +0.4 608,597 - +0.3 608,597 - +0.2 608,597 - -0.7 608,597 - -1.9 609,001 - +0.4 609,001 - +1.2 609,001 - -0.2 609,057 + +1.3 609,118 - +1.2 609,118 - -0.0 609,142 - -1.5 609,142 - -0.4 609,510 + H281DRAFT_02436 0.33 +0.3 609,550 - H281DRAFT_02436 0.36 -0.8 609,635 - H281DRAFT_02436 0.42 -0.2 609,883 + H281DRAFT_02436 0.58 +0.1
Or see this region's nucleotide sequence